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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415430   probable chlorophyll(ide) b reductase NYC1, chloroplastic 
 ath-u.5   NYC1   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   NYC1_2   protein NON-YELLOW COLORING 1 
 gma-u.5   NYC1_1   protein NON-YELLOW COLORING 1 
 vvi-u.5   100259397   probable chlorophyll(ide) b reductase NYC1, chloroplastic 
 ppo-u.5   7458766   probable chlorophyll(ide) b reductase NYC1, chloroplastic 
 mtr-u.5   11442626   probable chlorophyll(ide) b reductase NYC1, chloroplastic 
 sly-u.5   101258872   probable chlorophyll(ide) b reductase NYC1, chloroplastic 
 osa-u.5   4327178   probable chlorophyll(ide) b reductase NYC1, chloroplastic 
 zma-u.5   100281115   uncharacterized LOC100281115 
 zma-u.5   103649763   uncharacterized LOC103649763 

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Top 50 coexpressed genes to 106415430 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106415430 (bna-r.1 coexpression data)

CoexMap"106415430"


bnaLOC106415430 | Entrez gene ID : 106415430    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00860 [list] [network] Porphyrin metabolism (154 genes)
GO BP
GO:0010304 [list] [network] PSII associated light-harvesting complex II catabolic process  (4 genes)  IEA  
GO:0015996 [list] [network] chlorophyll catabolic process  (14 genes)  IEA  
GO CC
GO MF
GO:0034256 [list] [network] chlorophyll(ide) b reductase activity  (4 genes)  IEA  
Protein XP_013711591.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_013711591.2)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_013711591.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415430
ath-u.5
for
NYC1
gma-u.5
for
NYC1_2
gma-u.5
for
NYC1_1
vvi-u.5
for
100259397
ppo-u.5
for
7458766
mtr-u.5
for
11442626
sly-u.5
for
101258872
osa-u.5
for
4327178
zma-u.5
for
100281115
zma-u.5
for
103649763


Ortholog ID: 8533
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC106445844 LOC106415430 LOC103833353 LOC103863639 NYC1 LOC107907214 LOC107958763 LOC102617189 NYC1_2 NYC1_1 LOC100259397 LOC7458766 LOC11442626 LOC101258872 LOC102601206 LOC107825949 LOC107819263 LOC4327178 LOC100281115 LOC103649763 LOC123069340 LOC123077855 LOC123443233 LOC8081366 LOC100842430 CHLRE_12g517700v5
Function* probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic NAD(P)-binding Rossmann-fold superfamily protein probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic protein NON-YELLOW COLORING 1 protein NON-YELLOW COLORING 1 probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic putative chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic uncharacterized LOC100281115 uncharacterized LOC103649763 probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic probable chlorophyll(ide) b reductase NYC1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
bra00230 Purine metabolism 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00860 Porphyrin metabolism 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath04146 Peroxisome 3
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma01240 Biosynthesis of cofactors 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 5
mtr00906 Carotenoid biosynthesis 3
mtr04082 Neuroactive ligand signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04070 Phosphatidylinositol signaling system 3
tae00860 Porphyrin metabolism 2
tae00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 5
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106445844 106415430 103833353 103863639 826942 107907214 107958763 102617189 100797007 100784978 100259397 7458766 11442626 101258872 102601206 107825949 107819263 4327178 100281115 103649763 123069340 123077855 123443233 8081366 100842430 5722636
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