Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415490   chlorophyll a-b binding protein CP24, chloroplastic-like 
 ath-u.5   LHCB6   light harvesting complex photosystem II subunit 6 
 gma-u.5   100783223   chlorophyll a-b binding protein CP24 10A, chloroplastic 
 gma-u.5   100527463   light harvesting complex photosystem II subunit 
 gma-u.5   100500118   light harvesting complex photosystem II subunit 6 
 vvi-u.5   100241887   chlorophyll a-b binding protein CP24 10A, chloroplastic-like 
 ppo-u.5   7473011   chlorophyll a-b binding protein CP24 10A, chloroplastic 
 mtr-u.5   11430346   chlorophyll a-b binding protein CP24 10A, chloroplastic 
 sly-u.5   LHCP   chlorophyll a-b binding protein CP24 10B, chloroplastic-like 
 sly-u.5   CAB-10A   Chlorophyll a-b binding protein CP24 10A, chloroplastic 
 osa-u.5   4336028   chlorophyll a-b binding protein CP24, chloroplastic 
 zma-u.5   100273752   uncharacterized LOC100273752 
 zma-u.5   542321   light harvesting chlorophyll a/b binding protein 6 

close


Top 50 coexpressed genes to 106415490 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106415490 (bna-r.1 coexpression data)

CoexMap"106415490"


bnaLOC106415490 | Entrez gene ID : 106415490    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 3 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00196 [list] [network] Photosynthesis - antenna proteins (65 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (68 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (379 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (9970 genes)  IEA  
GO MF
Protein XP_013711675.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013711675.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_013711675.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415490
ath-u.5
for
LHCB6
gma-u.5
for
100783223
gma-u.5
for
100527463
gma-u.5
for
100500118
vvi-u.5
for
100241887
ppo-u.5
for
7473011
mtr-u.5
for
11430346
sly-u.5
for
LHCP
sly-u.5
for
CAB-10A
osa-u.5
for
4336028
zma-u.5
for
100273752
zma-u.5
for
542321


Ortholog ID: 5614
Species bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106346808 LOC106367078 LOC103842881 LOC103836017 LHCB6 LOC107898919 LOC121214817 LOC102609463 LOC100527463 LOC100783223 LOC100241887 LOC7473011 LOC11430346 CAB-10A LHCP LOC102586172 LOC102586836 LOC107792047 LOC107830507 LOC4336028 LOC100273752 LOC123189406 LOC123053510 LOC123426891 LOC8085855 LOC100842091
Function* chlorophyll a-b binding protein CP24, chloroplastic-like chlorophyll a-b binding protein CP24, chloroplastic-like chlorophyll a-b binding protein CP24, chloroplastic chlorophyll a-b binding protein CP24 10B, chloroplastic light harvesting complex photosystem II subunit 6 chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24 10A, chloroplastic light harvesting complex photosystem II subunit chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24 10A, chloroplastic-like chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24 10A, chloroplastic Chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24 10B, chloroplastic-like chlorophyll a-b binding protein CP24 10B, chloroplastic chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24 10A, chloroplastic-like chlorophyll a-b binding protein CP24 10A, chloroplastic chlorophyll a-b binding protein CP24, chloroplastic uncharacterized LOC100273752 chlorophyll a-b binding protein CP24 10B, chloroplastic chlorophyll a-b binding protein CP24 10B, chloroplastic chlorophyll a-b binding protein CP24 10B, chloroplastic chlorophyll a-b binding protein CP24 10B, chloroplastic chlorophyll a-b binding protein CP24, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 9
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 11
ath00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 12
ghi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 8
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 15
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 13
gma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 13
vvi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 7
mtr00195 Photosynthesis 6
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 9
sot00195 Photosynthesis 6
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 12
sot00860 Porphyrin metabolism 4
sot00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 7
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 4
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 2
nta00730 Thiamine metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 8
osa00195 Photosynthesis 5
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 12
zma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 10
tae00860 Porphyrin metabolism 6
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 11
tae00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 9
hvu00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 4
sbi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 12
bdi00195 Photosynthesis 5
bdi00860 Porphyrin metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106346808 106367078 103842881 103836017 838151 107898919 121214817 102609463 100527463 100783223 100241887 7473011 11430346 101256629 101256131 102586172 102586836 107792047 107830507 4336028 100273752 123189406 123053510 123426891 8085855 100842091
The preparation time of this page was 0.1 [sec].