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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415643   pinin-like 
 ath-u.5   AT1G15200   protein-protein interaction regulator family protein 
 gma-u.5   100801958   pinin 
 gma-u.5   100801229   pinin 
 vvi-u.5   100245237   uncharacterized LOC100245237 
 ppo-u.5   7478153   uncharacterized LOC7478153 
 ppo-u.5   7470527   uncharacterized LOC7470527 
 mtr-u.5   11421161   pinin 
 sly-u.5   101248146   uncharacterized LOC101248146 
 osa-u.5   4333834   uncharacterized LOC4333834 
 zma-u.5   100283191   pinin/SDK/memA/ protein conserved region containing protein 
 zma-u.5   100191788   putative pinin_SDK_memA domain family protein 

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Top 50 coexpressed genes to 106415643 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106415643 (bna-r.1 coexpression data)

CoexMap"106415643"


bnaLOC106415643 | Entrez gene ID : 106415643    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
Protein XP_048621208.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1  (predict for XP_048621208.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_048621208.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415643

.
ath-u.5
for
AT1G15200

.
gma-u.5
for
100801958

.
gma-u.5
for
100801229

.
vvi-u.5
for
100245237

.
ppo-u.5
for
7478153

.
ppo-u.5
for
7470527

.
mtr-u.5
for
11421161

.
sly-u.5
for
101248146

.
osa-u.5
for
4333834

.
zma-u.5
for
100283191

.
zma-u.5
for
100191788

.


Ortholog ID: 7033
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G15200 LOC100801958 LOC100801229 LOC101248146 LOC4333834 LOC100191788 LOC100283191 LOC103872307 LOC103843175 LOC100245237 LOC7478153 LOC7470527 LOC11421161 LOC123095811 LOC123087161 LOC123447339 LOC107928887 LOC107939223 LOC106415643 LOC106439985 CHLRE_09g387300v5 LOC8063414 LOC102599072 LOC102625418 LOC100834865 LOC107803145 LOC107768853
Function* protein-protein interaction regulator family protein pinin pinin uncharacterized LOC101248146 uncharacterized LOC4333834 putative pinin_SDK_memA domain family protein pinin/SDK/memA/ protein conserved region containing protein pinin pinin uncharacterized LOC100245237 uncharacterized LOC7478153 uncharacterized LOC7470527 pinin pinin pinin pinin pinin pinin pinin-like pinin uncharacterized protein pinin pinin uncharacterized LOC102625418 pinin uncharacterized LOC107803145 uncharacterized LOC107768853
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 8
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03040 Spliceosome 4
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838086 100801958 100801229 101248146 4333834 100191788 100283191 103872307 103843175 100245237 7478153 7470527 11421161 123095811 123087161 123447339 107928887 107939223 106415643 106439985 66054573 8063414 102599072 102625418 100834865 107803145 107768853
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