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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415959   26S proteasome regulatory subunit 10B homolog A 
 bna-r.1   106396388   26S proteasome regulatory subunit 10B homolog A 
 bna-r.1   106369687   26S proteasome regulatory subunit 10B homolog A 
 bna-r.1   106349542   26S proteasome regulatory subunit 10B homolog A 
 bra-r.6   103828000   26S proteasome regulatory subunit 10B homolog A 
 bra-r.6   103848574   26S proteasome regulatory subunit 10B homolog A 
 ath-u.5   RPT4A   regulatory particle triple-A ATPase 4A 
 ath-u.5   AT1G45000   AAA-type ATPase family protein 
 ghi-r.1   107905461   26S proteasome regulatory subunit S10B homolog B 
 ghi-r.1   107957946   26S proteasome regulatory subunit S10B homolog B 
 ghi-r.1   107957595   26S proteasome regulatory subunit S10B homolog B 
 cit-r.1   102626381   26S proteasome regulatory subunit S10B homolog B 
 gma-u.5   100785863   26S proteasome regulatory subunit 10B homolog A 
 gma-u.5   100788475   26S proteasome regulatory subunit 10B homolog A 
 gma-u.5   100794489   26S proteasome regulatory subunit 10B homolog A 
 vvi-u.5   100243563   26S proteasome regulatory subunit S10B homolog B 
 vvi-u.5   100252341   26S proteasome regulatory subunit S10B homolog B 
 ppo-u.5   7477634   26S proteasome regulatory subunit S10B homolog B 
 ppo-u.5   7479720   26S proteasome regulatory subunit S10B homolog B 
 ppo-u.5   7470010   26S proteasome regulatory subunit S10B homolog B 
 mtr-u.5   11417253   26S proteasome regulatory subunit S10B homolog B 
 mtr-u.5   25490224   26S proteasome regulatory subunit 10B homolog A 
 sly-u.5   101259892   26S proteasome regulatory subunit 10B homolog A-like 
 sly-u.5   RPT4a   26S proteasomal subunit RPT4a 
 sot-r.1   102589500   26S protease regulatory subunit S10B homolog B-like 
 nta-r.1   107761373   26S proteasome regulatory subunit S10B homolog B 
 nta-r.1   107765194   26S proteasome regulatory subunit S10B homolog B-like 
 nta-r.1   107767815   26S proteasome regulatory subunit S10B homolog B-like 
 osa-u.5   4341487   26S proteasome regulatory subunit S10B homolog B 
 osa-u.5   4328642   26S proteasome regulatory subunit S10B homolog B 
 zma-u.5   100383510   26S protease regulatory subunit S10B homolog B 
 zma-u.5   100282100   26S protease regulatory subunit S10B 
 zma-u.5   100273945   26S proteasome regulatory subunit 10B homolog A 
 tae-r.2   123147124   26S proteasome regulatory subunit 10B homolog A 
 tae-r.2   123136671   26S proteasome regulatory subunit S10B homolog B 
 tae-r.2   123132619   26S proteasome regulatory subunit S10B homolog B 
 hvu-r.1   123407431   26S proteasome regulatory subunit S10B homolog B 
 hvu-r.1   123402805   26S proteasome regulatory subunit S10B homolog B-like 
 sbi-r.1   8065084   26S protease regulatory subunit S10B homolog B 
 sbi-r.1   8082914   26S protease regulatory subunit S10B homolog B 
 bdi-r.1   100843882   26S proteasome regulatory subunit S10B homolog B 
 bdi-r.1   100835701   26S proteasome regulatory subunit S10B homolog B 
 cre-r.1   CHLRE_17g710150v5   uncharacterized protein 

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Top 50 coexpressed genes to 106415959 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106415959 (bna-r.1 coexpression data)

CoexMap"106415959"


bnaLOC106415959 | Entrez gene ID : 106415959    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 3 2 3 2 2 1 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03050 [list] [network] Proteasome (219 genes)
GO BP
GO:0045899 [list] [network] positive regulation of RNA polymerase II transcription preinitiation complex assembly  (10 genes)  IEA  
GO CC
GO:0031597 [list] [network] cytosolic proteasome complex  (10 genes)  IEA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (65 genes)  IEA  
GO MF
GO:0036402 [list] [network] proteasome-activating activity  (46 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (1360 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013712226.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  mito 1,  pero 1,  cysk 1  (predict for XP_013712226.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013712226.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415959
bna-r.1
for
106396388
bna-r.1
for
106369687
bna-r.1
for
106349542
bra-r.6
for
103828000
bra-r.6
for
103848574
ath-u.5
for
RPT4A
ath-u.5
for
AT1G45000
ghi-r.1
for
107905461
ghi-r.1
for
107957946
ghi-r.1
for
107957595
cit-r.1
for
102626381
gma-u.5
for
100785863
gma-u.5
for
100788475
gma-u.5
for
100794489
vvi-u.5
for
100243563
vvi-u.5
for
100252341
ppo-u.5
for
7477634
ppo-u.5
for
7479720
ppo-u.5
for
7470010
mtr-u.5
for
11417253
mtr-u.5
for
25490224
sly-u.5
for
101259892
sly-u.5
for
RPT4a
sot-r.1
for
102589500
nta-r.1
for
107761373
nta-r.1
for
107765194
nta-r.1
for
107767815
osa-u.5
for
4341487
osa-u.5
for
4328642
zma-u.5
for
100383510
zma-u.5
for
100282100
zma-u.5
for
100273945
tae-r.2
for
123147124
tae-r.2
for
123136671
tae-r.2
for
123132619
hvu-r.1
for
123407431
hvu-r.1
for
123402805
sbi-r.1
for
8065084
sbi-r.1
for
8082914
bdi-r.1
for
100843882
bdi-r.1
for
100835701
cre-r.1
for
CHLRE_17g710150v5


Ortholog ID: 2584
Species bna bna bna bra bra ath ath ghi ghi ghi cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106415959 LOC106369687 LOC106430430 LOC103828000 LOC103848574 RPT4A AT1G45000 LOC107957595 LOC107910205 LOC107887899 LOC102626381 LOC100785863 LOC100794489 LOC100802514 LOC100243563 LOC100252341 LOC7477634 LOC7479720 LOC7456357 LOC11417253 LOC25490224 LOC101259892 RPT4a LOC102589500 LOC107767815 LOC107783234 LOC107815805 LOC4341487 LOC4328642 LOC100383510 LOC100282100 LOC100273945 LOC123156808 LOC123158046 LOC123165042 LOC123407431 LOC123402805 LOC8065084 LOC8082914 LOC100843882 LOC100835701 CHLRE_17g710150v5
Function* 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A regulatory particle triple-A ATPase 4A AAA-type ATPase family protein 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit 10B homolog A-like 26S proteasomal subunit RPT4a 26S protease regulatory subunit S10B homolog B-like 26S proteasome regulatory subunit S10B homolog B-like 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S protease regulatory subunit S10B homolog B 26S protease regulatory subunit S10B 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit 10B homolog A 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B-like 26S protease regulatory subunit S10B homolog B 26S protease regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B 26S proteasome regulatory subunit S10B homolog B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 13
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00562 Inositol phosphate metabolism 3
ghi00340 Histidine metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 11
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 14
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00620 Pyruvate metabolism 3
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 9
mtr03083 Polycomb repressive complex 2
mtr03015 mRNA surveillance pathway 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 15
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 5
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta03082 ATP-dependent chromatin remodeling 3
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta03082 ATP-dependent chromatin remodeling 3
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 11
zma04141 Protein processing in endoplasmic reticulum 3
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 8
zma01200 Carbon metabolism 5
zma00020 Citrate cycle (TCA cycle) 4
zma00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 15
tae03420 Nucleotide excision repair 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 8
tae03050 Proteasome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 9
tae03040 Spliceosome 4
tae04141 Protein processing in endoplasmic reticulum 2
tae00010 Glycolysis / Gluconeogenesis 2
tae00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 6
sbi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 11
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi00190 Oxidative phosphorylation 4
bdi04145 Phagosome 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106415959 106369687 106430430 103828000 103848574 834316 841065 107957595 107910205 107887899 102626381 100785863 100794489 100802514 100243563 100252341 7477634 7479720 7456357 11417253 25490224 101259892 101268039 102589500 107767815 107783234 107815805 4341487 4328642 100383510 100282100 100273945 123156808 123158046 123165042 123407431 123402805 8065084 8082914 100843882 100835701 5717140
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