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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106416855   rRNA 2'-O-methyltransferase fibrillarin 2 
 bna-r.1   106444625   rRNA 2'-O-methyltransferase fibrillarin 2 
 bna-r.1   106361337   rRNA 2'-O-methyltransferase fibrillarin 2 
 bna-r.1   106347100   rRNA 2'-O-methyltransferase fibrillarin 2 
 bra-r.6   103861582   mediator of RNA polymerase II transcription subunit 36a 
 bra-r.6   103863368   probable mediator of RNA polymerase II transcription subunit 36b 
 ath-u.5   FIB2   fibrillarin 2 
 ath-u.5   FIB1   fibrillarin 1 
 ghi-r.1   121209584   rRNA 2'-O-methyltransferase fibrillarin 2 
 ghi-r.1   107951276   rRNA 2'-O-methyltransferase fibrillarin 2 
 ghi-r.1   107917830   rRNA 2'-O-methyltransferase fibrillarin 1 
 cit-r.1   102629115   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 gma-u.5   100788688   rRNA 2'-O-methyltransferase fibrillarin 2 
 gma-u.5   100789137   rRNA 2'-O-methyltransferase fibrillarin 2 
 gma-u.5   100797625   rRNA 2'-O-methyltransferase fibrillarin 2 
 vvi-u.5   100266267   rRNA 2'-O-methyltransferase fibrillarin 1 
 ppo-u.5   7484920   rRNA 2'-O-methyltransferase fibrillarin 1 
 ppo-u.5   7474066   rRNA 2'-O-methyltransferase fibrillarin 1 
 mtr-u.5   11440720   rRNA 2'-O-methyltransferase fibrillarin 1 
 mtr-u.5   25496400   rRNA 2'-O-methyltransferase fibrillarin 1 
 sly-u.5   101261490   rRNA 2'-O-methyltransferase fibrillarin 2-like 
 sot-r.1   102584645   mediator of RNA polymerase II transcription subunit 36a-like 
 nta-r.1   107768907   mediator of RNA polymerase II transcription subunit 36a-like 
 nta-r.1   107779020   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 osa-u.5   4331181   rRNA 2'-O-methyltransferase fibrillarin 2 
 osa-u.5   9266224   rRNA 2'-O-methyltransferase fibrillarin 1 
 zma-u.5   100282167   uncharacterized LOC100282167 
 tae-r.2   123139921   rRNA 2'-O-methyltransferase fibrillarin 1 
 tae-r.2   123129055   rRNA 2'-O-methyltransferase fibrillarin 1 
 tae-r.2   123165498   rRNA 2'-O-methyltransferase fibrillarin 1 
 hvu-r.1   123404338   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 hvu-r.1   123407385   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 sbi-r.1   8059696   probable mediator of RNA polymerase II transcription subunit 36b 
 sbi-r.1   8065563   probable mediator of RNA polymerase II transcription subunit 36b 
 bdi-r.1   100840221   probable mediator of RNA polymerase II transcription subunit 36b 
 bdi-r.1   100846789   probable mediator of RNA polymerase II transcription subunit 36b 
 cre-r.1   CHLRE_02g077300v5   uncharacterized protein 

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Top 50 coexpressed genes to 106416855 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106416855 (bna-r.1 coexpression data)

CoexMap"106416855"


bnaLOC106416855 | Entrez gene ID : 106416855    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 3 1 2 2 1 1 2 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO:0000494 [list] [network] box C/D sno(s)RNA 3'-end processing  (10 genes)  IEA  
GO:0031167 [list] [network] rRNA methylation  (78 genes)  IEA  
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (36 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (155 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
GO:1990259 [list] [network] histone H2AQ104 methyltransferase activity  (10 genes)  IEA  
GO:0008649 [list] [network] rRNA methyltransferase activity  (59 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_048610155.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 2,  cyto_nucl 2  (predict for XP_048610155.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_048610155.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106416855
bna-r.1
for
106444625
bna-r.1
for
106361337
bna-r.1
for
106347100
bra-r.6
for
103861582
bra-r.6
for
103863368
ath-u.5
for
FIB2
ath-u.5
for
FIB1
ghi-r.1
for
121209584
ghi-r.1
for
107951276
ghi-r.1
for
107917830
cit-r.1
for
102629115
gma-u.5
for
100788688
gma-u.5
for
100789137
gma-u.5
for
100797625
vvi-u.5
for
100266267
ppo-u.5
for
7484920
ppo-u.5
for
7474066
mtr-u.5
for
11440720
mtr-u.5
for
25496400
sly-u.5
for
101261490
sot-r.1
for
102584645
nta-r.1
for
107768907
nta-r.1
for
107779020
osa-u.5
for
4331181
osa-u.5
for
9266224
zma-u.5
for
100282167
tae-r.2
for
123139921
tae-r.2
for
123129055
tae-r.2
for
123165498
hvu-r.1
for
123404338
hvu-r.1
for
123407385
sbi-r.1
for
8059696
sbi-r.1
for
8065563
bdi-r.1
for
100840221
bdi-r.1
for
100846789
cre-r.1
for
CHLRE_02g077300v5


Ortholog ID: 3718
Species bna bna bna bra bra ath ath ghi ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106444625 LOC106409785 LOC106426404 LOC103861582 LOC103863368 FIB2 FIB1 LOC107917830 LOC107908112 LOC107904604 LOC102629115 LOC100789137 LOC100797625 LOC100266267 LOC7484920 LOC7474066 LOC11440720 LOC25496400 LOC101261490 LOC102584645 LOC107768907 LOC107779020 LOC4331181 LOC9266224 LOC100282167 LOC123139921 LOC123165498 LOC123159877 LOC123404338 LOC123407385 LOC8059696 LOC8065563 LOC100840221 LOC100846789 CHLRE_02g077300v5
Function* rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 mediator of RNA polymerase II transcription subunit 36a probable mediator of RNA polymerase II transcription subunit 36b fibrillarin 2 fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2-like mediator of RNA polymerase II transcription subunit 36a-like mediator of RNA polymerase II transcription subunit 36a-like rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1 uncharacterized LOC100282167 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 1-like probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 13
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi04626 Plant-pathogen interaction 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 6
gma00240 Pyrimidine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 10
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03008 Ribosome biogenesis in eukaryotes 7
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 5
nta03082 ATP-dependent chromatin remodeling 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
cre00230 Purine metabolism 2
cre01232 Nucleotide metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106444625 106409785 106426404 103861582 103863368 828668 835323 107917830 107908112 107904604 102629115 100789137 100797625 100266267 7484920 7474066 11440720 25496400 101261490 102584645 107768907 107779020 4331181 9266224 100282167 123139921 123165498 123159877 123404338 123407385 8059696 8065563 100840221 100846789 5727229
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