ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106418340	DNA-binding protein SMUBP-2-like
ath-u.5	AT2G03270	DNA-binding protein
gma-u.5	100810545	DNA-binding protein SMUBP-2
gma-u.5	100801854	DNA-binding protein SMUBP-2
vvi-u.5	100262429	uncharacterized LOC100262429
ppo-u.5	7496151	uncharacterized LOC7496151
mtr-u.5	11413327	DNA-binding protein SMUBP-2
sly-u.5	101249337	uncharacterized LOC101249337
osa-u.5	4333346	uncharacterized LOC4333346
zma-u.5	100280381	uncharacterized LOC100280381

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0043139 [list] [network] 5'-3' DNA helicase activity	(7 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(1360 genes)	IEA
GO:0003723 [list] [network] RNA binding	(3852 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5995 genes)	IEA
GO:0003677 [list] [network] DNA binding	(6522 genes)	IEA

Protein

XP_048624513.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_048624513.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_048624513.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106418340	ath-u.5 for AT2G03270	gma-u.5 for 100810545	gma-u.5 for 100801854	vvi-u.5 for 100262429	ppo-u.5 for 7496151	mtr-u.5 for 11413327	sly-u.5 for 101249337	osa-u.5 for 4333346	zma-u.5 for 100280381

Ortholog ID: 9972

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

DNA-binding protein SMUBP-2-like

DNA-binding protein SMUBP-2

DNA-binding protein

DNA-binding protein SMUBP-2

uncharacterized LOC102627247

DNA-binding protein SMUBP-2

uncharacterized LOC100262429

uncharacterized LOC7496151

DNA-binding protein SMUBP-2

uncharacterized LOC101249337

DNA-binding protein SMUBP-2

uncharacterized LOC107767374

uncharacterized LOC107792306

uncharacterized LOC4333346

uncharacterized LOC100280381

DNA-binding protein SMUBP-2

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	4
bna03022	Basal transcription factors	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna00270	Cysteine and methionine metabolism	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00410	beta-Alanine metabolism	2
ghi00640	Propanoate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	3
ghi00540	Lipopolysaccharide biosynthesis	2
ghi00220	Arginine biosynthesis	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00760	Nicotinate and nicotinamide metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma04517	IgSF CAM signaling	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03022	Basal transcription factors	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	2
nta03040	Spliceosome	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

106437947

106418340

103839413

814856

107891290

107889542

102627247

100810545

100801854

100262429

7496151

11413327

101249337

102591799

107767374

107792306

4333346

100280381

123123222

123105424

123452732

8063003

100844439

5716031

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106418340 (bna-r.1 coexpression data)

Top 50 enrichment test to 106418340 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106418340 (bna-r.1 coexpression data)

Top 50 enrichment test to 106418340 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**