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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106419189   60S ribosome subunit biogenesis protein NIP7 homolog 
 bna-r.1   106359587   60S ribosome subunit biogenesis protein NIP7 homolog 
 bna-r.1   106446848   60S ribosome subunit biogenesis protein NIP7 homolog 
 bna-r.1   106445826   60S ribosome subunit biogenesis protein NIP7 homolog 
 bra-r.6   103870356   60S ribosome subunit biogenesis protein NIP7 homolog 
 bra-r.6   103860799   60S ribosome subunit biogenesis protein NIP7 homolog 
 bra-r.6   103833523   60S ribosome subunit biogenesis protein NIP7 homolog 
 ath-u.5   AT4G15770   RNA binding protein 
 ghi-r.1   107936146   60S ribosome subunit biogenesis protein NIP7 homolog 
 ghi-r.1   121202881   60S ribosome subunit biogenesis protein NIP7 homolog 
 cit-r.1   102623594   uncharacterized LOC102623594 
 gma-u.5   100800715   60S ribosome subunit biogenesis protein NIP7 homolog 
 gma-u.5   100527285   PUA domain-containg protein 
 vvi-u.5   100264731   uncharacterized LOC100264731 
 vvi-u.5   100247303   60S ribosome subunit biogenesis protein NIP7 homolog-like 
 ppo-u.5   7475954   uncharacterized LOC7475954 
 mtr-u.5   25490208   60S ribosome subunit biogenesis protein NIP7 homolog 
 sly-u.5   101250451   uncharacterized LOC101250451 
 sot-r.1   102579856   60S ribosome subunit biogenesis protein NIP7 homolog 
 nta-r.1   107808294   uncharacterized LOC107808294 
 nta-r.1   107796512   uncharacterized LOC107796512 
 osa-u.5   4344241   uncharacterized LOC4344241 
 zma-u.5   100283150   60S ribosome subunit biogenesis protein NIP7 
 tae-r.2   123043754   60S ribosome subunit biogenesis protein NIP7 homolog 
 tae-r.2   123051616   60S ribosome subunit biogenesis protein NIP7 homolog 
 hvu-r.1   123424774   60S ribosome subunit biogenesis protein NIP7 homolog 
 sbi-r.1   8081964   60S ribosome subunit biogenesis protein NIP7 homolog 
 bdi-r.1   100838663   60S ribosome subunit biogenesis protein NIP7 homolog 
 cre-r.1   CHLRE_12g528900v5   uncharacterized protein 

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Top 50 coexpressed genes to 106419189 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106419189 (bna-r.1 coexpression data)

CoexMap"106419189"


bnaLOC106419189 | Entrez gene ID : 106419189    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 2 1 2 2 1 1 1 1 2 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042255 [list] [network] ribosome assembly  (240 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (285 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (103 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013715401.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_013715401.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013715401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106419189
bna-r.1
for
106359587
bna-r.1
for
106446848
bna-r.1
for
106445826
bra-r.6
for
103870356
bra-r.6
for
103860799
bra-r.6
for
103833523
ath-u.5
for
AT4G15770
ghi-r.1
for
107936146
ghi-r.1
for
121202881
cit-r.1
for
102623594
gma-u.5
for
100800715
gma-u.5
for
100527285
vvi-u.5
for
100264731
vvi-u.5
for
100247303
ppo-u.5
for
7475954
mtr-u.5
for
25490208
sly-u.5
for
101250451
sot-r.1
for
102579856
nta-r.1
for
107808294
nta-r.1
for
107796512
osa-u.5
for
4344241
zma-u.5
for
100283150
tae-r.2
for
123043754
tae-r.2
for
123051616
hvu-r.1
for
123424774
sbi-r.1
for
8081964
bdi-r.1
for
100838663
cre-r.1
for
CHLRE_12g528900v5


Ortholog ID: 6299
Species bna bna bna bra bra bra ath ghi ghi cit gma gma vvi vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106359587 LOC106446848 LOC106445826 LOC103870356 LOC103860799 LOC103833523 AT4G15770 LOC107936146 LOC121202881 LOC102623594 LOC100800715 LOC100527285 LOC100264731 LOC100247303 LOC7475954 LOC25490208 LOC101250451 LOC102579856 LOC107808294 LOC107796512 LOC4344241 LOC100283150 LOC123043754 LOC123051616 LOC123187549 LOC123424774 LOC8081964 LOC100838663 CHLRE_12g528900v5
Function* 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog RNA binding protein 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized LOC102623594 60S ribosome subunit biogenesis protein NIP7 homolog PUA domain-containg protein uncharacterized LOC100264731 60S ribosome subunit biogenesis protein NIP7 homolog-like uncharacterized LOC7475954 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized LOC101250451 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized LOC107808294 uncharacterized LOC107796512 uncharacterized LOC4344241 60S ribosome subunit biogenesis protein NIP7 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03040 Spliceosome 4
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 3
tae00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03010 Ribosome 3
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106359587 106446848 106445826 103870356 103860799 103833523 827257 107936146 121202881 102623594 100800715 100527285 100264731 100247303 7475954 25490208 101250451 102579856 107808294 107796512 4344241 100283150 123043754 123051616 123187549 123424774 8081964 100838663 5722435
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