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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445826   60S ribosome subunit biogenesis protein NIP7 homolog 
 ath-u.5   AT4G15770   RNA binding protein 
 gma-u.5   100800715   60S ribosome subunit biogenesis protein NIP7 homolog 
 gma-u.5   100527285   PUA domain-containg protein 
 vvi-u.5   100264731   uncharacterized LOC100264731 
 vvi-u.5   100247303   60S ribosome subunit biogenesis protein NIP7 homolog-like 
 ppo-u.5   7475954   uncharacterized LOC7475954 
 mtr-u.5   25490208   60S ribosome subunit biogenesis protein NIP7 homolog 
 sly-u.5   101250451   uncharacterized LOC101250451 
 osa-u.5   4344241   uncharacterized LOC4344241 
 zma-u.5   100283150   60S ribosome subunit biogenesis protein NIP7 

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Top 50 coexpressed genes to 106445826 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445826 (bna-r.1 coexpression data)

CoexMap"106445826"


bnaLOC106445826 | Entrez gene ID : 106445826    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042255 [list] [network] ribosome assembly  (240 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (285 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (103 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013742919.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for XP_013742919.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013742919.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445826

.
ath-u.5
for
AT4G15770

.
gma-u.5
for
100800715

.
gma-u.5
for
100527285

.
vvi-u.5
for
100264731

.
vvi-u.5
for
100247303

.
ppo-u.5
for
7475954

.
mtr-u.5
for
25490208

.
sly-u.5
for
101250451

.
osa-u.5
for
4344241

.
zma-u.5
for
100283150

.


Ortholog ID: 6299
Species ath gma gma sly osa zma bra bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G15770 LOC100527285 LOC100800715 LOC101250451 LOC4344241 LOC100283150 LOC103860799 LOC103870356 LOC100247303 LOC100264731 LOC7475954 LOC25490208 LOC123187549 LOC123051616 LOC123424774 LOC107936146 LOC121202881 LOC106446848 LOC106445826 CHLRE_12g528900v5 LOC8081964 LOC102579856 LOC102623594 LOC100838663 LOC107796512 LOC107808294
Function* RNA binding protein PUA domain-containg protein 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized LOC101250451 uncharacterized LOC4344241 60S ribosome subunit biogenesis protein NIP7 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog-like uncharacterized LOC100264731 uncharacterized LOC7475954 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized protein 60S ribosome subunit biogenesis protein NIP7 homolog 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized LOC102623594 60S ribosome subunit biogenesis protein NIP7 homolog uncharacterized LOC107796512 uncharacterized LOC107808294
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
sly03010 Ribosome 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 3
tae00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03040 Spliceosome 4
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03010 Ribosome 3
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827257 100527285 100800715 101250451 4344241 100283150 103860799 103870356 100247303 100264731 7475954 25490208 123187549 123051616 123424774 107936146 121202881 106446848 106445826 5722435 8081964 102579856 102623594 100838663 107796512 107808294
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