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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106420432   malate dehydrogenase [NADP], chloroplastic 
 bna-r.1   106435080   malate dehydrogenase [NADP], chloroplastic-like 
 bna-r.1   106387162   malate dehydrogenase [NADP], chloroplastic-like 
 bna-r.1   106388230   malate dehydrogenase [NADP], chloroplastic-like 
 bra-r.6   103851645   malate dehydrogenase [NADP], chloroplastic 
 bra-r.6   103845258   malate dehydrogenase [NADP], chloroplastic 
 bra-r.6   103856701   malate dehydrogenase [NADP], chloroplastic 
 ath-u.5   AT5G58330   lactate/malate dehydrogenase family protein 
 ghi-r.1   107943658   malate dehydrogenase [NADP], chloroplastic 
 ghi-r.1   107904294   malate dehydrogenase [NADP], chloroplastic 
 cit-r.1   102622984   malate dehydrogenase [NADP], chloroplastic 
 gma-u.5   100305890   malate dehydrogenase [NADP], chloroplastic 
 gma-u.5   100782567   malate dehydrogenase [NADP], chloroplastic 
 vvi-u.5   100247974   malate dehydrogenase [NADP], chloroplastic 
 ppo-u.5   7479845   malate dehydrogenase [NADP], chloroplastic 
 mtr-u.5   25484827   malate dehydrogenase [NADP], chloroplastic 
 sly-u.5   mdh   malate dehydrogenase 
 sly-u.5   chMDH   chloroplast malate dehydrogenase 
 sot-r.1   102582818   malate dehydrogenase [NADP], chloroplastic 
 nta-r.1   107788885   malate dehydrogenase [NADP], chloroplastic-like 
 nta-r.1   107778629   malate dehydrogenase [NADP], chloroplastic-like 
 osa-u.5   4346332   malate dehydrogenase [NADP], chloroplastic 
 zma-u.5   542374   malate dehydrogenase 6 
 tae-r.2   123101856   malate dehydrogenase [NADP], chloroplastic-like 
 tae-r.2   123159028   malate dehydrogenase [NADP] 1, chloroplastic 
 tae-r.2   123165753   malate dehydrogenase [NADP] 1, chloroplastic 
 hvu-r.1   123411341   malate dehydrogenase [NADP] 1, chloroplastic-like 
 sbi-r.1   110436993   malate dehydrogenase [NADP] 2, chloroplastic 
 sbi-r.1   8057802   malate dehydrogenase [NADP] 1, chloroplastic 
 bdi-r.1   100837587   malate dehydrogenase [NADP], chloroplastic 
 cre-r.1   CHLRE_09g410700v5   uncharacterized protein 

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Top 50 coexpressed genes to 106420432 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106420432 (bna-r.1 coexpression data)

CoexMap"106420432"


bnaLOC106420432 | Entrez gene ID : 106420432    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 2 1 2 1 1 1 2 1 2 1 1 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00620 [list] [network] Pyruvate metabolism (300 genes)
bna00710 [list] [network] Carbon fixation by Calvin cycle (246 genes)
bna01200 [list] [network] Carbon metabolism (888 genes)
GO BP
GO:0006107 [list] [network] oxaloacetate metabolic process  (18 genes)  IEA  
GO:0006108 [list] [network] malate metabolic process  (51 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (166 genes)  IEA  
GO CC
GO MF
GO:0046554 [list] [network] L-malate dehydrogenase (NADP+) activity  (5 genes)  IEA  
GO:0030060 [list] [network] L-malate dehydrogenase (NAD+) activity  (31 genes)  IEA  
Protein XP_048598924.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for XP_048598924.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048598924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106420432
bna-r.1
for
106435080
bna-r.1
for
106387162
bna-r.1
for
106388230
bra-r.6
for
103851645
bra-r.6
for
103845258
bra-r.6
for
103856701
ath-u.5
for
AT5G58330
ghi-r.1
for
107943658
ghi-r.1
for
107904294
cit-r.1
for
102622984
gma-u.5
for
100305890
gma-u.5
for
100782567
vvi-u.5
for
100247974
ppo-u.5
for
7479845
mtr-u.5
for
25484827
sly-u.5
for
mdh
sly-u.5
for
chMDH
sot-r.1
for
102582818
nta-r.1
for
107788885
nta-r.1
for
107778629
osa-u.5
for
4346332
zma-u.5
for
542374
tae-r.2
for
123101856
tae-r.2
for
123159028
tae-r.2
for
123165753
hvu-r.1
for
123411341
sbi-r.1
for
110436993
sbi-r.1
for
8057802
bdi-r.1
for
100837587
cre-r.1
for
CHLRE_09g410700v5


Ortholog ID: 5394
Species bna bna bna bra bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC106435080 LOC106388230 LOC106435756 LOC103851645 LOC103845258 LOC103856701 AT5G58330 LOC107943658 LOC107904294 LOC102622984 LOC100305890 LOC100782567 LOC100247974 LOC7479845 LOC25484827 mdh chMDH LOC102582818 LOC107788885 LOC107778629 LOC4346332 LOC542374 LOC123101856 LOC123165753 LOC123154897 LOC123411341 LOC110436993 LOC8057802 LOC100837587 CHLRE_09g410700v5
Function* malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic lactate/malate dehydrogenase family protein malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic malate dehydrogenase chloroplast malate dehydrogenase malate dehydrogenase [NADP], chloroplastic malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP], chloroplastic malate dehydrogenase 6 malate dehydrogenase [NADP], chloroplastic-like malate dehydrogenase [NADP] 1, chloroplastic malate dehydrogenase [NADP] 1, chloroplastic malate dehydrogenase [NADP] 1, chloroplastic-like malate dehydrogenase [NADP] 2, chloroplastic malate dehydrogenase [NADP] 1, chloroplastic malate dehydrogenase [NADP], chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 5
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 5
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 5
bna00710 Carbon fixation by Calvin cycle 5
bna01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra00460 Cyanoamino acid metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 3
bra04146 Peroxisome 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath00710 Carbon fixation by Calvin cycle 7
ath00630 Glyoxylate and dicarboxylate metabolism 6
ath00260 Glycine, serine and threonine metabolism 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 3
ghi00195 Photosynthesis 3
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 3
ghi00195 Photosynthesis 3
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00710 Carbon fixation by Calvin cycle 5
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00710 Carbon fixation by Calvin cycle 3
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma03010 Ribosome 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 9
vvi00710 Carbon fixation by Calvin cycle 6
vvi01240 Biosynthesis of cofactors 3
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00195 Photosynthesis 4
sly00710 Carbon fixation by Calvin cycle 4
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 9
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta00710 Carbon fixation by Calvin cycle 5
nta00620 Pyruvate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00010 Glycolysis / Gluconeogenesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae00620 Pyruvate metabolism 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00900 Terpenoid backbone biosynthesis 2
bdi04146 Peroxisome 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106435080 106388230 106435756 103851645 103845258 103856701 835945 107943658 107904294 102622984 100305890 100782567 100247974 7479845 25484827 543805 778287 102582818 107788885 107778629 4346332 542374 123101856 123165753 123154897 123411341 110436993 8057802 100837587 5722280
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