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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106421334   copper-transporting ATPase PAA2, chloroplastic 
 bna-r.1   106371676   copper-transporting ATPase PAA2, chloroplastic 
 bna-r.1   106368722   copper-transporting ATPase PAA1, chloroplastic 
 bna-r.1   106438538   copper-transporting ATPase PAA1, chloroplastic 
 bra-r.6   103845593   copper-transporting ATPase PAA2, chloroplastic 
 bra-r.6   103846231   copper-transporting ATPase PAA1, chloroplastic 
 ath-u.5   PAA1   P-type ATP-ase 1 
 ath-u.5   PAA2   uncharacterized protein 
 ghi-r.1   107887448   copper-transporting ATPase PAA1, chloroplastic 
 ghi-r.1   107908965   copper-transporting ATPase PAA1, chloroplastic 
 ghi-r.1   107962848   copper-transporting ATPase PAA2, chloroplastic 
 cit-r.1   102612705   copper-transporting ATPase PAA1, chloroplastic 
 cit-r.1   102619303   copper-transporting ATPase PAA2, chloroplastic 
 gma-u.5   100796210   copper-transporting ATPase PAA1, chloroplastic 
 gma-u.5   100777857   copper-transporting ATPase PAA1, chloroplastic 
 gma-u.5   HMA8   chloroplast copper-translocating HMA8 P-ATPase 
 vvi-u.5   100264462   copper-transporting ATPase PAA2, chloroplastic 
 vvi-u.5   100257685   copper-transporting ATPase PAA1, chloroplastic 
 ppo-u.5   18107733   copper-transporting ATPase PAA2, chloroplastic 
 ppo-u.5   7470538   copper-transporting ATPase PAA1, chloroplastic 
 ppo-u.5   7478156   copper-transporting ATPase PAA1, chloroplastic 
 mtr-u.5   25493272   copper-transporting ATPase PAA1, chloroplastic 
 mtr-u.5   11428787   copper-transporting ATPase PAA2, chloroplastic 
 sly-u.5   101267332   copper-transporting ATPase PAA2, chloroplastic 
 sly-u.5   101265776   copper-transporting ATPase PAA1, chloroplastic 
 sot-r.1   102600832   copper-transporting ATPase PAA2, chloroplastic-like 
 sot-r.1   102582410   copper-transporting ATPase PAA1, chloroplastic 
 sot-r.1   102597236   copper-transporting ATPase PAA2, chloroplastic-like 
 nta-r.1   107773106   copper-transporting ATPase PAA2, chloroplastic 
 nta-r.1   107788472   copper-transporting ATPase PAA2, chloroplastic 
 nta-r.1   107811884   copper-transporting ATPase PAA1, chloroplastic 
 osa-u.5   4331814   copper-transporting ATPase PAA2, chloroplastic 
 osa-u.5   4345883   copper-transporting ATPase PAA1, chloroplastic 
 zma-u.5   100383364   uncharacterized LOC100383364 
 zma-u.5   100381708   uncharacterized LOC100381708 
 tae-r.2   123164433   copper-transporting ATPase PAA1, chloroplastic 
 tae-r.2   123150949   copper-transporting ATPase PAA1, chloroplastic 
 tae-r.2   123084728   copper-transporting ATPase PAA2, chloroplastic 
 hvu-r.1   123449600   copper-transporting ATPase PAA2, chloroplastic 
 hvu-r.1   123406919   copper-transporting ATPase PAA1, chloroplastic 
 sbi-r.1   8059792   copper-transporting ATPase PAA2, chloroplastic 
 sbi-r.1   8067039   copper-transporting ATPase PAA1, chloroplastic 
 bdi-r.1   100831918   copper-transporting ATPase PAA2, chloroplastic 
 bdi-r.1   100823284   copper-transporting ATPase PAA1, chloroplastic 
 cre-r.1   CHLRE_10g422201v5   uncharacterized protein 
 cre-r.1   CHLRE_10g424775v5   uncharacterized protein 

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Top 50 coexpressed genes to 106421334 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106421334 (bna-r.1 coexpression data)

CoexMap"106421334"


bnaLOC106421334 | Entrez gene ID : 106421334    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 3 2 3 2 2 3 3 2 2 3 2 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04016 [list] [network] MAPK signaling pathway - plant (457 genes)
GO BP
GO:0055070 [list] [network] copper ion homeostasis  (33 genes)  IEA  
GO:0006812 [list] [network] monoatomic cation transport  (931 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (9970 genes)  IEA  
GO MF
GO:0043682 [list] [network] P-type divalent copper transporter activity  (4 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (203 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (1360 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013717627.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  E.R. 3,  chlo 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_013717627.1)
Subcellular
localization
TargetP
chlo 8,  mito 5  (predict for XP_013717627.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106421334
bna-r.1
for
106371676
bna-r.1
for
106368722
bna-r.1
for
106438538
bra-r.6
for
103845593
bra-r.6
for
103846231
ath-u.5
for
PAA1
ath-u.5
for
PAA2
ghi-r.1
for
107887448
ghi-r.1
for
107908965
ghi-r.1
for
107962848
cit-r.1
for
102612705
cit-r.1
for
102619303
gma-u.5
for
100796210
gma-u.5
for
100777857
gma-u.5
for
HMA8
vvi-u.5
for
100264462
vvi-u.5
for
100257685
ppo-u.5
for
18107733
ppo-u.5
for
7470538
ppo-u.5
for
7478156
mtr-u.5
for
25493272
mtr-u.5
for
11428787
sly-u.5
for
101267332
sly-u.5
for
101265776
sot-r.1
for
102600832
sot-r.1
for
102582410
sot-r.1
for
102597236
nta-r.1
for
107773106
nta-r.1
for
107788472
nta-r.1
for
107811884
osa-u.5
for
4331814
osa-u.5
for
4345883
zma-u.5
for
100383364
zma-u.5
for
100381708
tae-r.2
for
123164433
tae-r.2
for
123150949
tae-r.2
for
123084728
hvu-r.1
for
123449600
hvu-r.1
for
123406919
sbi-r.1
for
8059792
sbi-r.1
for
8067039
bdi-r.1
for
100831918
bdi-r.1
for
100823284
cre-r.1
for
CHLRE_10g422201v5
cre-r.1
for
CHLRE_10g424775v5


Ortholog ID: 3034
Species bna bna bna bra bra ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC106421334 LOC106371676 LOC106438538 LOC103845593 LOC103846231 PAA1 PAA2 LOC107887448 LOC107908965 LOC107900981 LOC102612705 LOC102619303 LOC100796210 LOC100777857 HMA8 LOC100264462 LOC100257685 LOC18107733 LOC7478156 LOC25493272 LOC11428787 LOC101267332 LOC101265776 LOC102600832 LOC102582410 LOC102597236 LOC107773106 LOC107811884 LOC107763623 LOC4331814 LOC4345883 LOC100383364 LOC100381708 LOC123164433 LOC123150949 LOC123098640 LOC123449600 LOC123406919 LOC8059792 LOC8067039 LOC100831918 LOC100823284 CHLRE_10g422201v5 CHLRE_10g424775v5
Function* copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic P-type ATP-ase 1 uncharacterized protein copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic chloroplast copper-translocating HMA8 P-ATPase copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic-like copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic-like copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic uncharacterized LOC100383364 uncharacterized LOC100381708 copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 10
bna01240 Biosynthesis of cofactors 10
bna04016 MAPK signaling pathway - plant 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath00480 Glutathione metabolism 2
ath04016 MAPK signaling pathway - plant 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi00561 Glycerolipid metabolism 2
ghi03060 Protein export 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi00561 Glycerolipid metabolism 2
ghi03060 Protein export 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00280 Valine, leucine and isoleucine degradation 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit04016 MAPK signaling pathway - plant 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma00591 Linoleic acid metabolism 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 6
gma04146 Peroxisome 5
gma00350 Tyrosine metabolism 2
gma00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi04146 Peroxisome 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03060 Protein export 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot01240 Biosynthesis of cofactors 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 5
sot01240 Biosynthesis of cofactors 5
sot00010 Glycolysis / Gluconeogenesis 4
sot01230 Biosynthesis of amino acids 4
sot00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00920 Sulfur metabolism 5
sot01320 Sulfur cycle 4
sot04016 MAPK signaling pathway - plant 2
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae04016 MAPK signaling pathway - plant 3
tae00450 Selenocompound metabolism 3
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi01200 Carbon metabolism 4
bdi00710 Carbon fixation by Calvin cycle 3
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106421334 106371676 106438538 103845593 103846231 829490 832253 107887448 107908965 107900981 102612705 102619303 100796210 100777857 100127402 100264462 100257685 18107733 7478156 25493272 11428787 101267332 101265776 102600832 102582410 102597236 107773106 107811884 107763623 4331814 4345883 100383364 100381708 123164433 123150949 123098640 123449600 123406919 8059792 8067039 100831918 100823284 5728250 5728203
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