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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106421522   pentatricopeptide repeat-containing protein At1g76280 
 bna-r.1   106402420   pentatricopeptide repeat-containing protein At1g76280-like 
 bra-r.6   103832078   pentatricopeptide repeat-containing protein At1g76280 
 ath-u.5   AT1G76280   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107917965   pentatricopeptide repeat-containing protein At1g76280 
 ghi-r.1   107922064   pentatricopeptide repeat-containing protein At1g76280 
 cit-r.1   102607024   pentatricopeptide repeat-containing protein At1g76280 
 gma-u.5   100780147   pentatricopeptide repeat-containing protein At1g76280 
 vvi-u.5   100262486   pentatricopeptide repeat-containing protein At1g76280 
 ppo-u.5   7487063   pentatricopeptide repeat-containing protein At1g76280 
 mtr-u.5   11412652   pentatricopeptide repeat-containing protein At1g76280 
 sly-u.5   101256379   pentatricopeptide repeat-containing protein At1g76280 
 sot-r.1   102593541   pentatricopeptide repeat-containing protein At1g76280 
 nta-r.1   107816207   pentatricopeptide repeat-containing protein At1g76280 
 osa-u.5   9268732   pentatricopeptide repeat-containing protein At1g76280 
 zma-u.5   103632892   pentatricopeptide repeat-containing protein At1g76280 
 tae-r.2   123098773   pentatricopeptide repeat-containing protein At1g76280 
 tae-r.2   123093496   pentatricopeptide repeat-containing protein At1g76280 
 tae-r.2   123088138   pentatricopeptide repeat-containing protein At1g76280 
 hvu-r.1   123449699   pentatricopeptide repeat-containing protein At1g76280 
 sbi-r.1   8083273   pentatricopeptide repeat-containing protein At1g76280 
 bdi-r.1   100832298   pentatricopeptide repeat-containing protein At1g76280 
 bdi-r.1   100824507   pentatricopeptide repeat-containing protein At1g76280 

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Top 50 coexpressed genes to 106421522 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106421522 (bna-r.1 coexpression data)

CoexMap"106421522"


bnaLOC106421522 | Entrez gene ID : 106421522    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 1 1 1 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013717810.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_013717810.1)
Subcellular
localization
TargetP
mito 8,  chlo 7  (predict for XP_013717810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106421522
bna-r.1
for
106402420
bra-r.6
for
103832078
ath-u.5
for
AT1G76280
ghi-r.1
for
107917965
ghi-r.1
for
107922064
cit-r.1
for
102607024
gma-u.5
for
100780147
vvi-u.5
for
100262486
ppo-u.5
for
7487063
mtr-u.5
for
11412652
sly-u.5
for
101256379
sot-r.1
for
102593541
nta-r.1
for
107816207
osa-u.5
for
9268732
zma-u.5
for
103632892
tae-r.2
for
123098773
tae-r.2
for
123093496
tae-r.2
for
123088138
hvu-r.1
for
123449699
sbi-r.1
for
8083273
bdi-r.1
for
100832298
bdi-r.1
for
100824507


Ortholog ID: 11136
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi bdi
Symbol LOC106421522 LOC106402420 LOC103832078 AT1G76280 LOC107917965 LOC107922064 LOC102607024 LOC100780147 LOC100262486 LOC7487063 LOC11412652 LOC101256379 LOC102593541 LOC107816207 LOC9268732 LOC103632892 LOC123098773 LOC123093496 LOC123088138 LOC123449699 LOC8083273 LOC100832298 LOC100824507
Function* pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280-like pentatricopeptide repeat-containing protein At1g76280 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280 pentatricopeptide repeat-containing protein At1g76280
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03018 RNA degradation 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae00230 Purine metabolism 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae00230 Purine metabolism 5
tae03008 Ribosome biogenesis in eukaryotes 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 3
sbi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106421522 106402420 103832078 843961 107917965 107922064 102607024 100780147 100262486 7487063 11412652 101256379 102593541 107816207 9268732 103632892 123098773 123093496 123088138 123449699 8083273 100832298 100824507
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