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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106425549   replication protein A 14 kDa subunit B 
 ath-u.5   AT3G52630   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT4G18590   Nucleic acid-binding, OB-fold-like protein 
 gma-u.5   100781484   replication protein A 14 kDa subunit B 
 gma-u.5   100306641   uncharacterized LOC100306641 
 vvi-u.5   100264936   replication protein A 14 kDa subunit B 
 vvi-u.5   100244193   replication protein A 14 kDa subunit B 
 ppo-u.5   18100634   replication protein A 14 kDa subunit A 
 ppo-u.5   7492250   replication protein A 14 kDa subunit A 
 mtr-u.5   25485573   replication protein A 14 kDa subunit B 
 mtr-u.5   25485575   replication protein A 14 kDa subunit B 
 mtr-u.5   11433064   replication protein A 14 kDa subunit B 
 sly-u.5   101255747   replication protein A 14 kDa subunit B-like 
 sly-u.5   101252714   replication protein A 14 kDa subunit B 
 osa-u.5   4327706   replication protein A 14 kDa subunit-like 
 zma-u.5   100283481   uncharacterized LOC100283481 
 zma-u.5   100126965   uncharacterized LOC100126965 

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Top 50 coexpressed genes to 106425549 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106425549 (bna-r.1 coexpression data)

CoexMap"106425549"


bnaLOC106425549 | Entrez gene ID : 106425549    
Species bna ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bdi sbi cre
Paralog 1 2 2 2 2 3 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03030 [list] [network] DNA replication (118 genes)
bna03420 [list] [network] Nucleotide excision repair (233 genes)
bna03430 [list] [network] Mismatch repair (77 genes)
bna03440 [list] [network] Homologous recombination (136 genes)
bna03460 [list] [network] Fanconi anemia pathway (105 genes)
GO BP
GO:0006260 [list] [network] DNA replication  (669 genes)  IEA  
GO:0006310 [list] [network] DNA recombination  (692 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (1192 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013721759.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  chlo_mito 3,  mito 1  (predict for XP_013721759.1)
Subcellular
localization
TargetP
other 3  (predict for XP_013721759.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106425549

.
ath-u.5
for
AT3G52630

.
ath-u.5
for
AT4G18590

.
gma-u.5
for
100781484

.
gma-u.5
for
100306641

.
vvi-u.5
for
100264936

.
vvi-u.5
for
100244193

.
ppo-u.5
for
18100634

.
ppo-u.5
for
7492250

.
mtr-u.5
for
25485573

.
mtr-u.5
for
25485575

.
mtr-u.5
for
11433064

.
sly-u.5
for
101255747

.
sly-u.5
for
101252714

.
osa-u.5
for
4327706

.
zma-u.5
for
100283481

.
zma-u.5
for
100126965

.


Ortholog ID: 4751
Species ath ath gma sly sly osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna bna sbi sot sot cit bdi bdi nta nta
Symbol AT3G52630 AT4G18590 LOC100306197 LOC101255747 LOC101252714 LOC4327706 LOC100283481 LOC100126965 LOC103856623 LOC100244193 LOC100264936 LOC18100634 LOC7492250 LOC25485573 LOC25485575 LOC123061021 LOC123069552 LOC123443383 LOC123443446 LOC107951716 LOC106375614 LOC106425549 LOC8085804 LOC102606244 LOC102600870 LOC102619411 LOC100829480 LOC100836018 LOC107773701 LOC107781065
Function* Nucleic acid-binding, OB-fold-like protein Nucleic acid-binding, OB-fold-like protein uncharacterized LOC100306197 replication protein A 14 kDa subunit B-like replication protein A 14 kDa subunit B replication protein A 14 kDa subunit-like uncharacterized LOC100283481 uncharacterized LOC100126965 replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B replication protein A 14 kDa subunit A replication protein A 14 kDa subunit A replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B replication protein A 14 kDa subunit replication protein A 14 kDa subunit replication protein A 14 kDa subunit-like replication protein A 14 kDa subunit-like replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B replication protein A 14 kDa subunit replication protein A 14 kDa subunit B-like replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B replication protein A 14 kDa subunit replication protein A 14 kDa subunit replication protein A 14 kDa subunit B replication protein A 14 kDa subunit B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma00240 Pyrimidine metabolism 5
gma01232 Nucleotide metabolism 5
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 3
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 3
osa03440 Homologous recombination 3
osa03050 Proteasome 2
osa03030 DNA replication 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03010 Ribosome 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03018 RNA degradation 2
zma03010 Ribosome 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 6
vvi03420 Nucleotide excision repair 4
vvi03410 Base excision repair 3
vvi03430 Mismatch repair 3
vvi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03040 Spliceosome 2
vvi03420 Nucleotide excision repair 2
vvi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 5
mtr03420 Nucleotide excision repair 3
mtr03430 Mismatch repair 3
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 5
mtr03420 Nucleotide excision repair 5
mtr03010 Ribosome 5
mtr03430 Mismatch repair 3
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03040 Spliceosome 6
tae03030 DNA replication 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03420 Nucleotide excision repair 6
tae03430 Mismatch repair 6
tae03440 Homologous recombination 6
tae03460 Fanconi anemia pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
ghi03420 Nucleotide excision repair 5
ghi03430 Mismatch repair 5
ghi03410 Base excision repair 4
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
bna03030 DNA replication 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 12
sot03420 Nucleotide excision repair 3
sot03430 Mismatch repair 3
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit03040 Spliceosome 5
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi00190 Oxidative phosphorylation 2
bdi03010 Ribosome 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 3
bdi03440 Homologous recombination 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 11
nta03420 Nucleotide excision repair 3
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 6
nta03420 Nucleotide excision repair 6
nta03410 Base excision repair 4
nta03430 Mismatch repair 4
nta03440 Homologous recombination 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824429 827591 100306197 101255747 101252714 4327706 100283481 100126965 103856623 100244193 100264936 18100634 7492250 25485573 25485575 123061021 123069552 123443383 123443446 107951716 106375614 106425549 8085804 102606244 102600870 102619411 100829480 100836018 107773701 107781065
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