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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106427710   ribosome biogenesis regulatory protein homolog 
 ath-u.5   AT2G37990   ribosome biogenesis regulatory protein (RRS1) family protein 
 gma-u.5   100527796   ribosome biogenesis regulatory protein homolog 
 gma-u.5   100500145   ribosome biogenesis regulatory protein homolog 
 vvi-u.5   100253336   ribosome biogenesis regulatory protein homolog 
 vvi-u.5   100252416   ribosome biogenesis regulatory protein homolog 
 ppo-u.5   7454378   ribosome biogenesis regulatory protein homolog 
 mtr-u.5   11421167   ribosome biogenesis regulatory protein homolog 
 sly-u.5   101263184   ribosome biogenesis regulatory protein homolog 
 osa-u.5   4337459   ribosome biogenesis regulatory protein homolog 
 zma-u.5   103634879   ribosome biogenesis regulatory protein homolog 
 zma-u.5   100192946   uncharacterized LOC100192946 

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Top 50 coexpressed genes to 106427710 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106427710 (bna-r.1 coexpression data)

CoexMap"106427710"


bnaLOC106427710 | Entrez gene ID : 106427710    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 1 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000055 [list] [network] ribosomal large subunit export from nucleus  (24 genes)  IEA  
GO:0000447 [list] [network] endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (24 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (285 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (963 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (103 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013723881.1 [sequence] [blastp]
XP_022554792.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cyto_E.R. 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_013723881.1)
nucl 5,  cyto 3,  cyto_E.R. 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_022554792.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013723881.1)
other 6  (predict for XP_022554792.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106427710

.
ath-u.5
for
AT2G37990

.
gma-u.5
for
100527796

.
gma-u.5
for
100500145

.
vvi-u.5
for
100253336

.
vvi-u.5
for
100252416

.
ppo-u.5
for
7454378

.
mtr-u.5
for
11421167

.
sly-u.5
for
101263184

.
osa-u.5
for
4337459

.
zma-u.5
for
103634879

.
zma-u.5
for
100192946

.


Ortholog ID: 5087
Species ath gma gma sly osa zma zma bra bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT2G37990 LOC100500145 LOC100527796 LOC101263184 LOC4337459 LOC100192946 LOC103634879 LOC103865644 LOC103857753 LOC100252416 LOC100253336 LOC7454378 LOC11421167 LOC123136005 LOC123188799 LOC123405404 LOC123402215 LOC107953703 LOC121204861 LOC106438172 LOC106402346 CHLRE_01g020950v5 LOC8056517 LOC102593560 LOC102624768 LOC100830935 LOC107790106
Function* ribosome biogenesis regulatory protein (RRS1) family protein ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog uncharacterized LOC100192946 ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog uncharacterized protein ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog ribosome biogenesis regulatory protein homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03013 Nucleocytoplasmic transport 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
ghi03015 mRNA surveillance pathway 3
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818377 100500145 100527796 101263184 4337459 100192946 103634879 103865644 103857753 100252416 100253336 7454378 11421167 123136005 123188799 123405404 123402215 107953703 121204861 106438172 106402346 5715202 8056517 102593560 102624768 100830935 107790106
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