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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428410   glycine-rich RNA-binding protein RZ1C 
 bna-r.1   111198010   glycine-rich RNA-binding protein RZ1C 
 bra-r.6   103829974   glycine-rich RNA-binding protein RZ1B 
 bra-r.6   103855562   glycine-rich RNA-binding protein RZ1C 
 ath-u.5   AtRZ-1c   RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 
 ath-u.5   AtRZ-1b   RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 
 ghi-r.1   107915794   glycine-rich RNA-binding protein RZ1C 
 ghi-r.1   107939272   glycine-rich RNA-binding protein RZ1C 
 cit-r.1   102613878   glycine-rich RNA-binding protein RZ1C 
 gma-u.5   100809519   glycine-rich RNA-binding protein RZ1C 
 gma-u.5   100776333   glycine-rich RNA-binding protein RZ1C 
 vvi-u.5   100261508   glycine-rich RNA-binding protein RZ1C 
 vvi-u.5   100257264   glycine-rich RNA-binding protein RZ1C 
 ppo-u.5   7479853   glycine-rich RNA-binding protein RZ1C 
 ppo-u.5   7468443   glycine-rich RNA-binding protein RZ1C 
 mtr-u.5   112417082   glycine-rich RNA-binding protein RZ1B 
 sly-u.5   101265498   glycine-rich RNA-binding protein RZ1C 
 sly-u.5   101261205   glycine-rich RNA-binding protein RZ1C-like 
 sot-r.1   102601577   glycine-rich RNA-binding protein RZ1C-like 
 sot-r.1   102605479   glycine-rich RNA-binding protein RZ1C 
 nta-r.1   107819783   glycine-rich RNA-binding protein RZ1C-like 
 nta-r.1   107769283   glycine-rich RNA-binding protein RZ1C 
 nta-r.1   107825054   glycine-rich RNA-binding protein RZ1C-like 
 osa-u.5   4333731   glycine-rich RNA-binding protein RZ1C 
 osa-u.5   4342599   glycine-rich RNA-binding protein RZ1C 
 zma-u.5   100381912   uncharacterized LOC100381912 
 zma-u.5   100285313   uncharacterized LOC100285313 
 zma-u.5   100191289   uncharacterized LOC100191289 
 tae-r.2   123044878   glycine-rich RNA-binding protein RZ1C 
 tae-r.2   123052698   glycine-rich RNA-binding protein RZ1C 
 tae-r.2   123090679   glycine-rich RNA-binding protein RZ1C 
 hvu-r.1   123426076   glycine-rich RNA-binding protein RZ1C-like 
 hvu-r.1   123447135   glycine-rich RNA-binding protein RZ1C-like 
 sbi-r.1   8063625   glycine-rich RNA-binding protein RZ1C 
 sbi-r.1   110436752   glycine-rich RNA-binding protein RZ1C-like 
 bdi-r.1   100827239   glycine-rich RNA-binding protein RZ1C 
 bdi-r.1   100823909   glycine-rich RNA-binding protein RZ1C 

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Top 50 coexpressed genes to 106428410 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106428410 (bna-r.1 coexpression data)

CoexMap"106428410"


bnaLOC106428410 | Entrez gene ID : 106428410    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 2 1 2 2 2 1 2 2 3 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013724624.2 [sequence] [blastp]
XP_013724628.2 [sequence] [blastp]
XP_022554197.1 [sequence] [blastp]
XP_048607754.1 [sequence] [blastp]
XP_048607755.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  mito 1  (predict for XP_013724624.2)
nucl 7,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_013724628.2)
nucl 5,  chlo 4,  mito 1  (predict for XP_022554197.1)
nucl 5,  chlo 4,  mito 1  (predict for XP_048607754.1)
nucl 7,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_048607755.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013724624.2)
mito 6,  other 5  (predict for XP_013724628.2)
other 7  (predict for XP_022554197.1)
other 7  (predict for XP_048607754.1)
mito 6,  other 5  (predict for XP_048607755.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428410
bna-r.1
for
111198010
bra-r.6
for
103829974
bra-r.6
for
103855562
ath-u.5
for
AtRZ-1c
ath-u.5
for
AtRZ-1b
ghi-r.1
for
107915794
ghi-r.1
for
107939272
cit-r.1
for
102613878
gma-u.5
for
100809519
gma-u.5
for
100776333
vvi-u.5
for
100261508
vvi-u.5
for
100257264
ppo-u.5
for
7479853
ppo-u.5
for
7468443
mtr-u.5
for
112417082
sly-u.5
for
101265498
sly-u.5
for
101261205
sot-r.1
for
102601577
sot-r.1
for
102605479
nta-r.1
for
107819783
nta-r.1
for
107769283
nta-r.1
for
107825054
osa-u.5
for
4333731
osa-u.5
for
4342599
zma-u.5
for
100381912
zma-u.5
for
100285313
zma-u.5
for
100191289
tae-r.2
for
123044878
tae-r.2
for
123052698
tae-r.2
for
123090679
hvu-r.1
for
123426076
hvu-r.1
for
123447135
sbi-r.1
for
8063625
sbi-r.1
for
110436752
bdi-r.1
for
100827239
bdi-r.1
for
100823909


Ortholog ID: 4431
Species bna bna bra bra ath ath ghi ghi cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC106428410 LOC111198010 LOC103829974 LOC103855562 AtRZ-1c AtRZ-1b LOC107915794 LOC107939272 LOC102613878 LOC100809519 LOC100776333 LOC100261508 LOC100257264 LOC7479853 LOC7468443 LOC112417082 LOC101265498 LOC101261205 LOC102601577 LOC102605479 LOC107819783 LOC107825054 LOC107777473 LOC4333731 LOC4342599 LOC100285313 LOC100191289 LOC100282673 LOC123044878 LOC123095694 LOC123188598 LOC123426076 LOC123447135 LOC8063625 LOC110436752 LOC100827239 LOC100823909
Function* glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1B glycine-rich RNA-binding protein RZ1C RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1B glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1B glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C uncharacterized LOC100285313 uncharacterized LOC100191289 glycine-rich RNA-binding protein 7 glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 9
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 8
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 11
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 4
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03015 mRNA surveillance pathway 4
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 11
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu03040 Spliceosome 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03015 mRNA surveillance pathway 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 6
sbi03015 mRNA surveillance pathway 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 3
bdi00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106428410 111198010 103829974 103855562 830307 842359 107915794 107939272 102613878 100809519 100776333 100261508 100257264 7479853 7468443 112417082 101265498 101261205 102601577 102605479 107819783 107825054 107777473 4333731 4342599 100285313 100191289 100282673 123044878 123095694 123188598 123426076 123447135 8063625 110436752 100827239 100823909
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