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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110436752   glycine-rich RNA-binding protein RZ1C-like 
 zma-u.5   100381912   uncharacterized LOC100381912 
 zma-u.5   100285313   uncharacterized LOC100285313 
 zma-u.5   100191289   uncharacterized LOC100191289 
 osa-u.5   4333731   glycine-rich RNA-binding protein RZ1C 
 osa-u.5   4342599   glycine-rich RNA-binding protein RZ1C 
 ath-u.5   AtRZ-1c   RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 
 ath-u.5   AtRZ-1b   RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein 
 gma-u.5   100809519   glycine-rich RNA-binding protein RZ1C 
 gma-u.5   100776333   glycine-rich RNA-binding protein RZ1C 
 sly-u.5   101265498   glycine-rich RNA-binding protein RZ1C 
 sly-u.5   101261205   glycine-rich RNA-binding protein RZ1C-like 
 vvi-u.5   100261508   glycine-rich RNA-binding protein RZ1C 
 vvi-u.5   100257264   glycine-rich RNA-binding protein RZ1C 
 ppo-u.5   7479853   glycine-rich RNA-binding protein RZ1C 
 ppo-u.5   7468443   glycine-rich RNA-binding protein RZ1C 
 mtr-u.5   112417082   glycine-rich RNA-binding protein RZ1B 

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Top 50 coexpressed genes to 110436752 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110436752 (sbi-r.1 coexpression data)

CoexMap"110436752"


sbiLOC110436752 | Entrez gene ID : 110436752    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 2 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021319872.1 [sequence] [blastp]
XP_021319876.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for XP_021319872.1)
nucl 5,  cyto 2,  mito 1,  chlo 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_021319876.1)
Subcellular
localization
TargetP
other 8  (predict for XP_021319872.1)
mito 7,  other 5  (predict for XP_021319876.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110436752

.
zma-u.5
for
100381912

.
zma-u.5
for
100285313

.
zma-u.5
for
100191289

.
osa-u.5
for
4333731

.
osa-u.5
for
4342599

.
ath-u.5
for
AtRZ-1c

.
ath-u.5
for
AtRZ-1b

.
gma-u.5
for
100809519

.
gma-u.5
for
100776333

.
sly-u.5
for
101265498

.
sly-u.5
for
101261205

.
vvi-u.5
for
100261508

.
vvi-u.5
for
100257264

.
ppo-u.5
for
7479853

.
ppo-u.5
for
7468443

.
mtr-u.5
for
112417082

.


Ortholog ID: 4431
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi nta nta
Symbol AtRZ-1c AtRZ-1b LOC100809519 LOC100776333 LOC101265498 LOC101261205 LOC4342599 LOC4333731 LOC100282673 LOC100191289 LOC103855562 LOC103829974 LOC100261508 LOC100257264 LOC7479853 LOC7468443 LOC112417082 LOC123044878 LOC123188598 LOC123426076 LOC123447135 LOC107915794 LOC107939272 LOC111198010 LOC106428410 LOC8063625 LOC110436752 LOC102601577 LOC102605479 LOC102613878 LOC100823909 LOC107819783 LOC107825054
Function* RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein 7 uncharacterized LOC100191289 glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1B glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1B glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C glycine-rich RNA-binding protein RZ1C-like glycine-rich RNA-binding protein RZ1C-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03015 mRNA surveillance pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 8
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 4
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 11
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 9
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu03040 Spliceosome 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03015 mRNA surveillance pathway 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 6
sbi03015 mRNA surveillance pathway 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 3
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 11
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830307 842359 100809519 100776333 101265498 101261205 4342599 4333731 100282673 100191289 103855562 103829974 100261508 100257264 7479853 7468443 112417082 123044878 123188598 123426076 123447135 107915794 107939272 111198010 106428410 8063625 110436752 102601577 102605479 102613878 100823909 107819783 107825054
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