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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428922   DNA-(apurinic or apyrimidinic site) endonuclease 
 ath-u.5   AT3G48425   DNAse I-like superfamily protein 
 gma-u.5   100817167   DNA-(apurinic or apyrimidinic site) endonuclease 
 vvi-u.5   100258672   DNA-(apurinic or apyrimidinic site) endonuclease 
 ppo-u.5   7453820   DNA-(apurinic or apyrimidinic site) endonuclease 
 sly-u.5   101256863   DNA-(apurinic or apyrimidinic site) endonuclease 
 osa-u.5   4351982   DNA-(apurinic or apyrimidinic site) endonuclease 
 zma-u.5   100277695   DNA-(apurinic or apyrimidinic site) lyase 

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Top 50 coexpressed genes to 106428922 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106428922 (bna-r.1 coexpression data)

CoexMap"106428922"


bnaLOC106428922 | Entrez gene ID : 106428922    
Species bna ath gma vvi ppo sly osa zma bdi mtr bra hvu cit sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006284 [list] [network] base-excision repair  (68 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008311 [list] [network] double-stranded DNA 3'-5' DNA exonuclease activity  (9 genes)  IEA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (15 genes)  IEA  
GO:0008081 [list] [network] phosphoric diester hydrolase activity  (169 genes)  IEA  
Protein XP_013725127.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  plas 1,  golg_plas 1,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_013725127.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013725127.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428922
ath-u.5
for
AT3G48425
gma-u.5
for
100817167
vvi-u.5
for
100258672
ppo-u.5
for
7453820
sly-u.5
for
101256863
osa-u.5
for
4351982
zma-u.5
for
100277695


Ortholog ID: 11334
Species bna bna bra ath ghi ghi cit gma vvi ppo sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106428618 LOC106428922 LOC103873147 AT3G48425 LOC121224261 LOC121211058 LOC102614833 LOC100817167 LOC100258672 LOC7453820 LOC101256863 LOC102605533 LOC107791366 LOC107760922 LOC4351982 LOC100277695 LOC123091219 LOC123096207 LOC123447833 LOC8076531 LOC100839762
Function* DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNAse I-like superfamily protein DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) lyase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03410 Base excision repair 4
ath03430 Mismatch repair 3
ath03040 Spliceosome 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106428618 106428922 103873147 824001 121224261 121211058 102614833 100817167 100258672 7453820 101256863 102605533 107791366 107760922 4351982 100277695 123091219 123096207 123447833 8076531 100839762
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