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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106429770   protein GIGANTEA 
 ath-u.5   GI   gigantea protein (GI) 
 gma-u.5   E2   protein GIGANTEA 
 gma-u.5   100781641   protein GIGANTEA 
 gma-u.5   GIGANTEA   protein GIGANTEA 
 vvi-u.5   100254197   protein GIGANTEA 
 ppo-u.5   7492485   protein GIGANTEA 
 ppo-u.5   7467800   protein GIGANTEA 
 sly-u.5   101258346   protein GIGANTEA-like 
 sly-u.5   101255788   protein GIGANTEA 
 osa-u.5   4325329   protein GIGANTEA-like 
 zma-u.5   100272803   uncharacterized LOC100272803 
 zma-u.5   100147733   uncharacterized LOC100147733 

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Top 50 coexpressed genes to 106429770 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106429770 (bna-r.1 coexpression data)

CoexMap"106429770"


bnaLOC106429770 | Entrez gene ID : 106429770    
Species bna ath gma vvi ppo sly osa zma hvu cit bra ghi mtr sbi bdi nta tae cre sot
Paralog 1 1 3 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04712 [list] [network] Circadian rhythm - plant (144 genes)
GO BP
GO:0048586 [list] [network] regulation of long-day photoperiodism, flowering  (10 genes)  IEA  
GO:0042752 [list] [network] regulation of circadian rhythm  (59 genes)  IEA  
GO:0006950 [list] [network] response to stress  (3469 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_013725974.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  nucl 3,  vacu 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_013725974.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013725974.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106429770
ath-u.5
for
GI
gma-u.5
for
E2
gma-u.5
for
100781641
gma-u.5
for
GIGANTEA
vvi-u.5
for
100254197
ppo-u.5
for
7492485
ppo-u.5
for
7467800
sly-u.5
for
101258346
sly-u.5
for
101255788
osa-u.5
for
4325329
zma-u.5
for
100272803
zma-u.5
for
100147733


Ortholog ID: 7043
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC106429770 LOC106400371 LOC103249166 GI LOC107910471 LOC121217871 LOC102626780 GIGANTEA E2 LOC100254197 LOC7467800 LOC7492485 LOC101258346 LOC101255788 LOC102578719 LOC102583457 LOC107765780 LOC107784760 LOC4325329 LOC100147733 LOC100272803 LOC123068975 LOC123077506 LOC123442959 LOC110433900 LOC100822621
Function* protein GIGANTEA protein GIGANTEA protein GIGANTEA gigantea protein (GI) protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA-like protein GIGANTEA protein GIGANTEA-like protein GIGANTEA-like protein GIGANTEA-like protein GIGANTEA protein GIGANTEA-like uncharacterized LOC100147733 uncharacterized LOC100272803 protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA protein GIGANTEA
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 7
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 7
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi00052 Galactose metabolism 2
ghi00430 Taurine and hypotaurine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi00430 Taurine and hypotaurine metabolism 2
ghi00460 Cyanoamino acid metabolism 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 5
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 8
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 8
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
osa01240 Biosynthesis of cofactors 3
osa00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 3
hvu00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 4
sbi00730 Thiamine metabolism 3
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106429770 106400371 103249166 838883 107910471 121217871 102626780 100779044 100800578 100254197 7467800 7492485 101258346 101255788 102578719 102583457 107765780 107784760 4325329 100147733 100272803 123068975 123077506 123442959 110433900 100822621
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