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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106430001   transcription factor bHLH154 
 bna-r.1   106454840   transcription factor bHLH153-like 
 bna-r.1   106441774   transcription factor bHLH153-like 
 bra-r.6   103867701   transcription factor bHLH153 
 bra-r.6   103836515   transcription factor bHLH153 
 ath-u.5   AT2G31730   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107927346   transcription factor bHLH153 
 ghi-r.1   107914608   transcription factor bHLH153 
 ghi-r.1   107903004   transcription factor bHLH153 
 cit-r.1   102616788   transcription factor bHLH153 
 gma-u.5   100809747   transcription factor bHLH153 
 gma-u.5   100527660   uncharacterized LOC100527660 
 vvi-u.5   100243890   transcription factor bHLH153 
 ppo-u.5   7498099   transcription factor bHLH153 
 ppo-u.5   18104588   transcription factor bHLH153 
 mtr-u.5   11444608   transcription factor bHLH153 
 sly-u.5   543581   transcription factor bHLH113 
 sot-r.1   102606118   transcription factor bHLH113-like 
 nta-r.1   107825642   transcription factor bHLH153 
 nta-r.1   107814373   transcription factor bHLH153 
 osa-u.5   4336261   transcription factor bHLH153 
 zma-u.5   100193902   uncharacterized LOC100193902 
 zma-u.5   100194340   uncharacterized LOC100194340 
 tae-r.2   123189758   transcription factor bHLH153 
 tae-r.2   123189617   transcription factor bHLH153 
 tae-r.2   123045865   transcription factor bHLH153 
 hvu-r.1   123427093   transcription factor bHLH153-like 
 sbi-r.1   110436601   transcription factor bHLH153-like 
 bdi-r.1   100837747   transcription factor bHLH153 

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Top 50 coexpressed genes to 106430001 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106430001 (bna-r.1 coexpression data)

CoexMap"106430001"


bnaLOC106430001 | Entrez gene ID : 106430001    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 3 1 2 1 2 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (792 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (968 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1531 genes)  IEA  
Protein XP_013726229.1 [sequence] [blastp]
XP_048610638.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  plas 1,  vacu 1  (predict for XP_013726229.1)
nucl 8,  cyto_nucl 4,  plas 1,  vacu 1  (predict for XP_048610638.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013726229.1)
other 8  (predict for XP_048610638.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106430001
bna-r.1
for
106454840
bna-r.1
for
106441774
bra-r.6
for
103867701
bra-r.6
for
103836515
ath-u.5
for
AT2G31730
ath-u.5
for
AT1G05710
ghi-r.1
for
107927346
ghi-r.1
for
107914608
ghi-r.1
for
107903004
cit-r.1
for
102616788
gma-u.5
for
100809747
gma-u.5
for
100527660
vvi-u.5
for
100243890
ppo-u.5
for
7498099
ppo-u.5
for
18104588
mtr-u.5
for
11444608
sly-u.5
for
543581
sot-r.1
for
102606118
nta-r.1
for
107825642
nta-r.1
for
107814373
osa-u.5
for
4336261
zma-u.5
for
100193902
zma-u.5
for
100194340
tae-r.2
for
123189758
tae-r.2
for
123189617
tae-r.2
for
123045865
hvu-r.1
for
123427093
sbi-r.1
for
110436601
bdi-r.1
for
100837747


Ortholog ID: 5268
Species bna bna bra bra bra ath ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC106430001 LOC106441774 LOC103867701 LOC103836515 LOC103844099 AT2G31730 AT1G05710 LOC107927346 LOC107914608 LOC107903004 LOC102616788 LOC100809747 LOC100527660 LOC100243890 LOC7498099 LOC18104588 LOC11444608 LOC543581 LOC102606118 LOC107825642 LOC107814373 LOC4336261 LOC100193902 LOC100194340 LOC123189617 LOC123045865 LOC123053739 LOC123427093 LOC110436601 LOC100837747
Function* transcription factor bHLH154 transcription factor bHLH153-like transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 uncharacterized LOC100527660 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH113 transcription factor bHLH113-like transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 uncharacterized LOC100193902 uncharacterized LOC100194340 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153 transcription factor bHLH153-like transcription factor bHLH153-like transcription factor bHLH153
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
ath00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
ghi03420 Nucleotide excision repair 5
ghi03430 Mismatch repair 5
ghi03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106430001 106441774 103867701 103836515 103844099 817730 837078 107927346 107914608 107903004 102616788 100809747 100527660 100243890 7498099 18104588 11444608 543581 102606118 107825642 107814373 4336261 100193902 100194340 123189617 123045865 123053739 123427093 110436601 100837747
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