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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106431163   plastocyanin 
 bna-r.1   106433715   plastocyanin 
 bna-r.1   106406273   plastocyanin 
 bra-r.6   103832056   plastocyanin 
 ath-u.5   DRT112   Cupredoxin superfamily protein 
 ath-u.5   PETE1   plastocyanin 1 
 ghi-r.1   121229431   plastocyanin 
 ghi-r.1   107937574   plastocyanin 
 cit-r.1   102622651   plastocyanin 
 gma-u.5   100306554   plastocyanin 
 gma-u.5   100499708   putative plastocyanin 
 vvi-u.5   100248911   plastocyanin 
 ppo-u.5   7496895   plastocyanin B, chloroplastic 
 ppo-u.5   7485623   plastocyanin A, chloroplastic 
 mtr-u.5   11426844   plastocyanin 
 sly-u.5   PETE   plastocyanin, chloroplastic 
 sot-r.1   102583807   plastocyanin, chloroplastic 
 nta-r.1   107812786   plastocyanin A'/A'' 
 nta-r.1   107792758   plastocyanin 
 osa-u.5   4339833   plastocyanin, chloroplastic-like 
 zma-u.5   103629356   plastocyanin, chloroplastic 
 zma-u.5   100192779   Plastocyanin major isoform chloroplastic 
 tae-r.2   123165221   plastocyanin, chloroplastic 
 tae-r.2   123150017   plastocyanin, chloroplastic 
 tae-r.2   123088670   plastocyanin, chloroplastic 
 hvu-r.1   123411665   plastocyanin, chloroplastic 
 sbi-r.1   8066782   plastocyanin, chloroplastic 
 bdi-r.1   100827604   plastocyanin, chloroplastic 
 cre-r.1   CHLRE_03g182551v5   uncharacterized protein 

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Top 50 coexpressed genes to 106431163 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106431163 (bna-r.1 coexpression data)

CoexMap"106431163"


bnaLOC106431163 | Entrez gene ID : 106431163    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (17 genes)  IEA  
GO MF
GO:0005507 [list] [network] copper ion binding  (203 genes)  IEA  
Protein XP_013727425.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013727425.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013727425.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106431163
bna-r.1
for
106433715
bna-r.1
for
106406273
bra-r.6
for
103832056
ath-u.5
for
DRT112
ath-u.5
for
PETE1
ghi-r.1
for
121229431
ghi-r.1
for
107937574
cit-r.1
for
102622651
gma-u.5
for
100306554
gma-u.5
for
100499708
vvi-u.5
for
100248911
ppo-u.5
for
7496895
ppo-u.5
for
7485623
mtr-u.5
for
11426844
sly-u.5
for
PETE
sot-r.1
for
102583807
nta-r.1
for
107812786
nta-r.1
for
107792758
osa-u.5
for
4339833
zma-u.5
for
103629356
zma-u.5
for
100192779
tae-r.2
for
123165221
tae-r.2
for
123150017
tae-r.2
for
123088670
hvu-r.1
for
123411665
sbi-r.1
for
8066782
bdi-r.1
for
100827604
cre-r.1
for
CHLRE_03g182551v5


Ortholog ID: 5889
Species bna bna bra ath ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106406273 LOC106440742 LOC103832056 DRT112 PETE1 LOC121229431 LOC107937574 LOC102622651 LOC100306554 LOC100499708 LOC100248911 LOC7496895 LOC7485623 LOC11426844 PETE LOC102583807 LOC107812786 LOC107792758 LOC4339833 LOC103629356 LOC100192779 LOC123165221 LOC123150017 LOC123088670 LOC123411665 LOC8066782 LOC100827604 CHLRE_03g182551v5
Function* plastocyanin plastocyanin plastocyanin Cupredoxin superfamily protein plastocyanin 1 plastocyanin plastocyanin plastocyanin plastocyanin putative plastocyanin plastocyanin plastocyanin B, chloroplastic plastocyanin A, chloroplastic plastocyanin plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin A'/A'' plastocyanin plastocyanin, chloroplastic-like plastocyanin, chloroplastic Plastocyanin major isoform chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic plastocyanin, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
bna00190 Oxidative phosphorylation 4
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00860 Porphyrin metabolism 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 6
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 8
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 14
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 11
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 5
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 7
nta00710 Carbon fixation by Calvin cycle 7
nta01200 Carbon metabolism 7
nta00195 Photosynthesis 5
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 15
osa00190 Oxidative phosphorylation 2
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
zma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 8
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00195 Photosynthesis 5
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 11
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
tae00710 Carbon fixation by Calvin cycle 7
tae01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 11
tae00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 5
hvu01200 Carbon metabolism 5
hvu00195 Photosynthesis 5
hvu00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 12
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00196 Photosynthesis - antenna proteins 14
cre00195 Photosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106406273 106440742 103832056 838622 843942 121229431 107937574 102622651 100306554 100499708 100248911 7496895 7485623 11426844 544053 102583807 107812786 107792758 4339833 103629356 100192779 123165221 123150017 123088670 123411665 8066782 100827604 5728459
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