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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106431467   glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic 
 ath-u.5   APL3   Glucose-1-phosphate adenylyltransferase family protein 
 ath-u.5   APL4   Glucose-1-phosphate adenylyltransferase family protein 
 ath-u.5   APL1   ADP glucose pyrophosphorylase large subunit 1 
 gma-u.5   100798736   glucose-1-phosphate adenylyltransferase large subunit 1 
 gma-u.5   100808791   glucose-1-phosphate adenylyltransferase large subunit 1 
 gma-u.5   100799431   glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic 
 vvi-u.5   100240927   glucose-1-phosphate adenylyltransferase small subunit, chloroplastic 
 vvi-u.5   100241983   glucose-1-phosphate adenylyltransferase large subunit 1 
 ppo-u.5   7456025   glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic 
 ppo-u.5   7479731   glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic 
 mtr-u.5   11417144   glucose-1-phosphate adenylyltransferase large subunit 1 
 mtr-u.5   25490207   glucose-1-phosphate adenylyltransferase large subunit 1 
 mtr-u.5   11418220   glucose-1-phosphate adenylyltransferase large subunit 1 
 sly-u.5   agpL3   ADP-glucose pyrophosphorylase large subunit 
 sly-u.5   AgpL1   ADP-glucose pyrophosphorylase large subunit 
 osa-u.5   4334020   glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic-like 
 osa-u.5   4326594   glucose-1-phosphate adenylyltransferase large subunit 2, cytosolic-like 
 osa-u.5   4339718   glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like 
 zma-u.5   542737   ADP-glucose pyrophosphorylase 
 zma-u.5   542072   ADP-glucose pyrophosphorylase small subunit 

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Top 50 coexpressed genes to 106431467 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106431467 (bna-r.1 coexpression data)

CoexMap"106431467"


bnaLOC106431467 | Entrez gene ID : 106431467    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 3 3 2 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00500 [list] [network] Starch and sucrose metabolism (474 genes)
bna00520 [list] [network] Amino sugar and nucleotide sugar metabolism (383 genes)
bna01250 [list] [network] Biosynthesis of nucleotide sugars (320 genes)
GO BP
GO:0005978 [list] [network] glycogen biosynthetic process  (27 genes)  IEA  
GO CC
GO MF
GO:0008878 [list] [network] glucose-1-phosphate adenylyltransferase activity  (15 genes)  IEA  
Protein XP_013727730.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  vacu 2  (predict for XP_013727730.3)
Subcellular
localization
TargetP
chlo 2  (predict for XP_013727730.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106431467
ath-u.5
for
APL3
ath-u.5
for
APL4
ath-u.5
for
APL1
gma-u.5
for
100798736
gma-u.5
for
100808791
gma-u.5
for
100799431
vvi-u.5
for
100240927
vvi-u.5
for
100241983
ppo-u.5
for
7456025
ppo-u.5
for
7479731
mtr-u.5
for
11417144
mtr-u.5
for
25490207
mtr-u.5
for
11418220
sly-u.5
for
agpL3
sly-u.5
for
AgpL1
osa-u.5
for
4334020
osa-u.5
for
4326594
osa-u.5
for
4339718
zma-u.5
for
542737
zma-u.5
for
542072


Ortholog ID: 367
Species bna bna bra ath ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa osa zma zma tae tae hvu hvu sbi bdi bdi cre cre
Symbol LOC106410767 LOC106446371 LOC103839024 APL1 APL4 LOC107942434 LOC107912483 LOC102629211 LOC100798736 LOC100792088 LOC100240927 LOC7456025 LOC11436552 LOC25490207 AgpL1 AGPS1 LOC107762694 LOC107806492 LOC4339718 LOC4346656 LOC542737 LOC542761 LOC100037637 LOC543278 LOC123407122 LOC123452988 LOC8083808 LOC100832788 LOC100837929 CHLRE_13g567950v5 CHLRE_03g188250v5
Function* glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic ADP glucose pyrophosphorylase large subunit 1 Glucose-1-phosphate adenylyltransferase family protein glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase large subunit 1-like glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase small subunit, chloroplastic glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic glucose-1-phosphate adenylyltransferase large subunit 1 ADP-glucose pyrophosphorylase large subunit glucose-1-phosphate adenylyltransferase large subunit 1-like glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic/amyloplastic-like ADP-glucose pyrophosphorylase shrunken 2 glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic-like glucose-1-phosphate adenylyltransferase large subunit-like glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase large subunit glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic/amyloplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 6
bna00500 Starch and sucrose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra04145 Phagosome 4
bra04148 Efferocytosis 4
bra00500 Starch and sucrose metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00710 Carbon fixation by Calvin cycle 5
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
ath00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 8
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 7
ghi00520 Amino sugar and nucleotide sugar metabolism 6
ghi01250 Biosynthesis of nucleotide sugars 6
ghi00061 Fatty acid biosynthesis 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 8
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00500 Starch and sucrose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr00860 Porphyrin metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 8
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 4
sly01240 Biosynthesis of cofactors 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 9
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 9
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 11
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 9
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
zma00500 Starch and sucrose metabolism 6
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 13
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu03010 Ribosome 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 12
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00500 Starch and sucrose metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 9
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00710 Carbon fixation by Calvin cycle 7
cre00500 Starch and sucrose metabolism 6
cre00030 Pentose phosphate pathway 5
cre00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 7
cre01200 Carbon metabolism 6
cre00710 Carbon fixation by Calvin cycle 5
cre00030 Pentose phosphate pathway 5
cre00520 Amino sugar and nucleotide sugar metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106410767 106446371 103839024 832042 816697 107942434 107912483 102629211 100798736 100792088 100240927 7456025 11436552 25490207 544283 102591766 107762694 107806492 4339718 4346656 542737 542761 100037637 543278 123407122 123452988 8083808 100832788 100837929 5719082 5717482
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