Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PGN   Tetratricopeptide repeat (TPR)-like superfamily protein 
 mtr-u.5   11413612   putative pentatricopeptide repeat-containing protein At1g56570 
 sly-u.5   101248822   putative pentatricopeptide repeat-containing protein At1g56570 
 osa-u.5   107277521   putative pentatricopeptide repeat-containing protein At1g56570 

close


Top 50 coexpressed genes to PGN (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to PGN (ath-u.5 coexpression data)

CoexMap"106432612"


bnaLOC106432612 | Entrez gene ID : 106432612    
Species ath mtr sly osa tae hvu zma vvi cit bra ghi ppo sbi bdi nta gma bna cre sot
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048595888.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_048595888.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_048595888.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
PGN
mtr-u.5
for
11413612
sly-u.5
for
101248822
osa-u.5
for
107277521


Ortholog ID: 12702
Species bra ath ghi ghi cit mtr sly sot nta nta osa bdi
Symbol LOC103838678 PGN LOC107886410 LOC107927191 LOC102606742 LOC11413612 LOC101248822 LOC102588331 LOC107778981 LOC107805917 LOC107277521 LOC100825281
Function* putative pentatricopeptide repeat-containing protein At1g56570 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570 putative pentatricopeptide repeat-containing protein At1g56570
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103838678 842111 107886410 107927191 102606742 11413612 101248822 102588331 107778981 107805917 107277521 100825281
The preparation time of this page was 0.1 [sec].