ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	BNAA10G04140D	uncharacterized BNAA10G04140D
bna-r.1	BNAC05G04270D	uncharacterized BNAC05G04270D
bna-r.1	BNAC08G01690D	uncharacterized BNAC08G01690D
bna-r.1	106387843	mitochondrial inner membrane protease subunit 1
bra-r.6	103857361	uncharacterized LOC103857361
ath-u.5	AT2G31140	Peptidase S24/S26A/S26B/S26C family protein
ath-u.5	AT1G06200	Peptidase S24/S26A/S26B/S26C family protein
ghi-r.1	107958646	mitochondrial inner membrane protease subunit 2
ghi-r.1	107955432	mitochondrial inner membrane protease subunit 2
ghi-r.1	107954609	uncharacterized LOC107954609
cit-r.1	102614262	uncharacterized LOC102614262
gma-u.5	100785852	mitochondrial inner membrane protease subunit 1-like
gma-u.5	100500100	uncharacterized LOC100500100
vvi-u.5	100256678	mitochondrial ATP-independent inner membrane protease subunit 2
ppo-u.5	7454350	uncharacterized LOC7454350
ppo-u.5	18096124	uncharacterized LOC18096124
mtr-u.5	25484257	uncharacterized LOC25484257
mtr-u.5	25484260	uncharacterized LOC25484260
sly-u.5	101259874	S26 Type I signal peptidase family protein
sot-r.1	102597558	uncharacterized LOC102597558
nta-r.1	107821453	mitochondrial ATP-independent inner membrane protease subunit 2-like
nta-r.1	107779203	mitochondrial ATP-independent inner membrane protease subunit 2-like
osa-u.5	4334892	mitochondrial ATP-independent inner membrane protease subunit 2
zma-u.5	100276073	uncharacterized LOC100276073
zma-u.5	100193542	uncharacterized LOC100193542
tae-r.2	123051141	uncharacterized LOC123051141
tae-r.2	123043275	uncharacterized LOC123043275
tae-r.2	123187093	uncharacterized LOC123187093
hvu-r.1	123424432	uncharacterized LOC123424432
sbi-r.1	8056946	uncharacterized LOC8056946
bdi-r.1	100823230	uncharacterized LOC100823230
cre-r.1	CHLRE_16g694703v5	uncharacterized protein

Top 50 coexpressed genes to BNAA10G04140D (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BNAA10G04140D (bna-r.1 coexpression data)

CoexMap"106434289"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006465 [list] [network] signal peptide processing

(74 genes)

IEA

GO CC

GO MF

GO:0004252 [list] [network] serine-type endopeptidase activity

(341 genes)

IEA

Protein

XP_013730580.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, chlo 1

(predict for XP_013730580.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_013730580.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAA10G04140D	bna-r.1 for BNAC05G04270D	bna-r.1 for BNAC08G01690D	bna-r.1 for 106387843	bra-r.6 for 103857361	ath-u.5 for AT2G31140	ath-u.5 for AT1G06200	ghi-r.1 for 107958646	ghi-r.1 for 107955432	ghi-r.1 for 107954609	cit-r.1 for 102614262	gma-u.5 for 100785852	gma-u.5 for 100500100	vvi-u.5 for 100256678	ppo-u.5 for 7454350	ppo-u.5 for 18096124	mtr-u.5 for 25484257	mtr-u.5 for 25484260	sly-u.5 for 101259874	sot-r.1 for 102597558	nta-r.1 for 107821453	nta-r.1 for 107779203	osa-u.5 for 4334892	zma-u.5 for 100276073	zma-u.5 for 100193542	tae-r.2 for 123051141	tae-r.2 for 123043275	tae-r.2 for 123187093	hvu-r.1 for 123424432	sbi-r.1 for 8056946	bdi-r.1 for 100823230	cre-r.1 for CHLRE_16g694703v5

Ortholog

Ortholog ID: 5693

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized BNAC05G04270D

uncharacterized BNAC08G01690D

mitochondrial inner membrane protease subunit 1

uncharacterized LOC103857361

Peptidase S24/S26A/S26B/S26C family protein

mitochondrial inner membrane protease subunit 2

uncharacterized LOC107954609

uncharacterized LOC107952871

uncharacterized LOC102614262

mitochondrial inner membrane protease subunit 1-like

uncharacterized LOC100500100

mitochondrial ATP-independent inner membrane protease subunit 2

uncharacterized LOC7454350

uncharacterized LOC18096124

uncharacterized LOC25484257

uncharacterized LOC25484260

S26 Type I signal peptidase family protein

uncharacterized LOC102597558

mitochondrial ATP-independent inner membrane protease subunit 2-like

mitochondrial ATP-independent inner membrane protease subunit 2

uncharacterized LOC100276073

uncharacterized LOC100193542

uncharacterized LOC123051141

uncharacterized LOC123043275

uncharacterized LOC123187093

uncharacterized LOC123424432

uncharacterized LOC8056946

uncharacterized LOC100823230

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3
bna00240	Pyrimidine metabolism	3
bna01232	Nucleotide metabolism	3
bna01240	Biosynthesis of cofactors	3
bna04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	4
bna01240	Biosynthesis of cofactors	4
bna00230	Purine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	7
ath00020	Citrate cycle (TCA cycle)	3
ath01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit03008	Ribosome biogenesis in eukaryotes	2
cit00190	Oxidative phosphorylation	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma03010	Ribosome	3
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	7
vvi03082	ATP-dependent chromatin remodeling	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	3
ppo03060	Protein export	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	3
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta03040	Spliceosome	3
nta03020	RNA polymerase	2
nta04146	Peroxisome	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	6
zma03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae00220	Arginine biosynthesis	2
tae00330	Arginine and proline metabolism	2
tae01230	Biosynthesis of amino acids	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu03083	Polycomb repressive complex	3
hvu04120	Ubiquitin mediated proteolysis	3
hvu04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	4
sbi03010	Ribosome	4
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
cre01240	Biosynthesis of cofactors	3
cre00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106400836

106365704

106387843

103857361

817670

837129

107958646

107954609

107952871

102614262

100785852

100500100

100256678

7454350

18096124

25484257

25484260

101259874

102597558

107821453

107779203

4334892

100276073

100193542

123051141

123043275

123187093

123424432

8056946

100823230

5724914

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Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	1	2	1	2	2	1	1	2	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAA10G04140D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAA10G04140D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**