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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106434375   plant UBX domain-containing protein 5 
 ath-u.5   PUX4   plant UBX domain containing protein 4 
 ath-u.5   PUX5   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma 
 ath-u.5   PUX3   UBA/UBX domain protein 
 gma-u.5   100792095   plant UBX domain-containing protein 4 
 gma-u.5   100806361   plant UBX domain-containing protein 4 
 gma-u.5   100820141   plant UBX domain-containing protein 4 
 vvi-u.5   100262315   plant UBX domain-containing protein 4 
 vvi-u.5   100243031   plant UBX domain-containing protein 4 
 ppo-u.5   7462075   plant UBX domain-containing protein 4 
 ppo-u.5   7484546   plant UBX domain-containing protein 4 
 ppo-u.5   7489882   plant UBX domain-containing protein 4 
 mtr-u.5   11430595   plant UBX domain-containing protein 4 
 mtr-u.5   25486233   plant UBX domain-containing protein 4 
 sly-u.5   101252989   plant UBX domain-containing protein 4 
 sly-u.5   101245776   plant UBX domain-containing protein 4 
 sly-u.5   101244442   plant UBX domain-containing protein 4-like 
 osa-u.5   4336083   plant UBX domain-containing protein 4 
 zma-u.5   100283360   UBA and UBX domain-containing protein 
 zma-u.5   100282371   uncharacterized LOC100282371 

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Top 50 coexpressed genes to 106434375 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106434375 (bna-r.1 coexpression data)

CoexMap"106434375"


bnaLOC106434375 | Entrez gene ID : 106434375    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 3 3 2 3 2 3 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04141 [list] [network] Protein processing in endoplasmic reticulum (648 genes)
GO BP
GO:0031468 [list] [network] nuclear membrane reassembly  (16 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (91 genes)  IEA  
GO:0007030 [list] [network] Golgi organization  (123 genes)  IEA  
GO:0061025 [list] [network] membrane fusion  (189 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (494 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3196 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (222 genes)  IEA  
Protein XP_022562570.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_022562570.2)
Subcellular
localization
TargetP
other 9  (predict for XP_022562570.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106434375

.
ath-u.5
for
PUX4

.
ath-u.5
for
PUX5

.
ath-u.5
for
PUX3

.
gma-u.5
for
100792095

.
gma-u.5
for
100806361

.
gma-u.5
for
100820141

.
vvi-u.5
for
100262315

.
vvi-u.5
for
100243031

.
ppo-u.5
for
7462075

.
ppo-u.5
for
7484546

.
ppo-u.5
for
7489882

.
mtr-u.5
for
11430595

.
mtr-u.5
for
25486233

.
sly-u.5
for
101252989

.
sly-u.5
for
101245776

.
sly-u.5
for
101244442

.
osa-u.5
for
4336083

.
zma-u.5
for
100283360

.
zma-u.5
for
100282371

.


Ortholog ID: 2283
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol PUX5 PUX4 LOC100792095 LOC100789588 LOC101244442 LOC101245776 LOC4336083 LOC100282371 LOC100283360 LOC103839847 LOC103859821 LOC100243031 LOC100262315 LOC7489882 LOC25486233 LOC11430595 LOC123045694 LOC123189462 LOC123426942 LOC121232134 LOC107958296 LOC106366981 LOC106437643 CHLRE_01g034451v5 LOC8057491 LOC102583198 LOC102603772 LOC102613799 LOC102619456 LOC100827538 LOC107784723 LOC107801130
Function* serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma plant UBX domain containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 uncharacterized LOC100282371 UBA and UBX domain-containing protein plant UBX domain-containing protein 4 plant UBX domain-containing protein 3 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 3 plant UBX domain-containing protein 3 uncharacterized protein plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4-like plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4 plant UBX domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 10
ath03040 Spliceosome 5
ath04144 Endocytosis 3
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04141 Protein processing in endoplasmic reticulum 4
gma04146 Peroxisome 2
gma03040 Spliceosome 2
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 17
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 4
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03050 Proteasome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma04141 Protein processing in endoplasmic reticulum 4
zma03420 Nucleotide excision repair 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04075 Plant hormone signal transduction 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 3
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
cre04141 Protein processing in endoplasmic reticulum 5
cre04120 Ubiquitin mediated proteolysis 4
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 12
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta04712 Circadian rhythm - plant 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827210 825736 100792095 100789588 101244442 101245776 4336083 100282371 100283360 103839847 103859821 100243031 100262315 7489882 25486233 11430595 123045694 123189462 123426942 121232134 107958296 106366981 106437643 66052091 8057491 102583198 102603772 102613799 102619456 100827538 107784723 107801130
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