ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106434775	uncharacterized LOC106434775
bna-r.1	125610183	uncharacterized LOC125610183
bna-r.1	106441493	uncharacterized LOC106441493
bna-r.1	125606965	uncharacterized LOC125606965
bra-r.6	103843361	uncharacterized LOC103843361
bra-r.6	103871934	uncharacterized LOC103871934
bra-r.6	103836106	uncharacterized LOC103836106
ath-u.5	AT3G02555	uncharacterized protein
ath-u.5	AT5G16110	uncharacterized protein
ath-u.5	AT1G13390	translocase subunit seca
ghi-r.1	107942923	uncharacterized LOC107942923
ghi-r.1	107952824	uncharacterized LOC107952824
ghi-r.1	107916677	uncharacterized LOC107916677
cit-r.1	102627691	uncharacterized LOC102627691
cit-r.1	102618664	hypothetical protein
gma-u.5	100305585	uncharacterized LOC100305585
gma-u.5	100306293	uncharacterized LOC100306293
vvi-u.5	100262793	uncharacterized LOC100262793
vvi-u.5	100266248	uncharacterized LOC100266248
vvi-u.5	100251510	uncharacterized LOC100251510
ppo-u.5	7477425	uncharacterized LOC7477425
ppo-u.5	7488359	uncharacterized LOC7488359
ppo-u.5	18099495	uncharacterized LOC18099495
mtr-u.5	11426069	uncharacterized LOC11426069
mtr-u.5	11422535	uncharacterized LOC11422535
sly-u.5	101257351	uncharacterized LOC101257351
sly-u.5	101254996	uncharacterized LOC101254996
sly-u.5	101257942	uncharacterized LOC101257942
sot-r.1	102582226	uncharacterized LOC102582226
sot-r.1	102582300	uncharacterized LOC102582300
sot-r.1	102594284	uncharacterized LOC102594284
nta-r.1	107830359	uncharacterized LOC107830359
nta-r.1	107762383	uncharacterized LOC107762383
nta-r.1	107762641	uncharacterized LOC107762641
osa-u.5	9271366	uncharacterized LOC9271366
zma-u.5	103633253	uncharacterized LOC103633253
zma-u.5	103650465	uncharacterized LOC103650465
tae-r.2	123102309	uncharacterized LOC123102309
tae-r.2	123110490	uncharacterized LOC123110490
tae-r.2	123119488	SH3 domain-containing protein C23A1.17
hvu-r.1	123451922	unconventional myosin-XVI-like
sbi-r.1	8076644	translation initiation factor IF-2
bdi-r.1	100843912	uncharacterized LOC100843912

Top 50 coexpressed genes to 106434775 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106434775 (bna-r.1 coexpression data)

CoexMap"106434775"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013731079.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, cyto 1, plas 1, extr 1, vacu 1, cyto_plas 1

(predict for XP_013731079.2)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_013731079.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106434775	bna-r.1 for 125610183	bna-r.1 for 106441493	bna-r.1 for 125606965	bra-r.6 for 103843361	bra-r.6 for 103871934	bra-r.6 for 103836106	ath-u.5 for AT3G02555	ath-u.5 for AT5G16110	ath-u.5 for AT1G13390	ghi-r.1 for 107942923	ghi-r.1 for 107952824	ghi-r.1 for 107916677	cit-r.1 for 102627691	cit-r.1 for 102618664	gma-u.5 for 100305585	gma-u.5 for 100306293	vvi-u.5 for 100262793	vvi-u.5 for 100266248	vvi-u.5 for 100251510	ppo-u.5 for 7477425	ppo-u.5 for 7488359	ppo-u.5 for 18099495	mtr-u.5 for 11426069	mtr-u.5 for 11422535	sly-u.5 for 101257351	sly-u.5 for 101254996	sly-u.5 for 101257942	sot-r.1 for 102582226	sot-r.1 for 102582300	sot-r.1 for 102594284	nta-r.1 for 107830359	nta-r.1 for 107762383	nta-r.1 for 107762641	osa-u.5 for 9271366	zma-u.5 for 103633253	zma-u.5 for 103650465	tae-r.2 for 123102309	tae-r.2 for 123110490	tae-r.2 for 123119488	hvu-r.1 for 123451922	sbi-r.1 for 8076644	bdi-r.1 for 100843912

Ortholog

Ortholog ID: 620

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC125601543

uncharacterized LOC106364420

uncharacterized LOC106397192

uncharacterized LOC103843361

uncharacterized LOC103858969

uncharacterized LOC103856181

uncharacterized protein

translocase subunit seca

uncharacterized LOC107942923

uncharacterized LOC107886636

uncharacterized LOC107912729

uncharacterized LOC102627691

hypothetical protein

uncharacterized LOC100306293

uncharacterized LOC100776729

uncharacterized LOC100788286

uncharacterized LOC100262793

uncharacterized LOC100266248

uncharacterized LOC100251510

uncharacterized LOC7488359

uncharacterized LOC18099495

uncharacterized LOC7487073

uncharacterized LOC11426069

uncharacterized LOC11422535

uncharacterized LOC25485491

uncharacterized LOC101254996

uncharacterized LOC101258832

uncharacterized LOC101263203

uncharacterized LOC102582300

uncharacterized LOC102605157

uncharacterized LOC102582373

uncharacterized LOC107766568

uncharacterized LOC107799347

uncharacterized LOC107816458

uncharacterized LOC9271366

uncharacterized LOC103633253

uncharacterized LOC103650465

uncharacterized LOC123102309

uncharacterized LOC123110490

SH3 domain-containing protein C23A1.17

unconventional myosin-XVI-like

translation initiation factor IF-2

uncharacterized LOC100843912

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	6
sly04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5
bdi04145	Phagosome	3
bdi04142	Lysosome	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

125601543

106364420

106397192

103843361

103858969

103856181

820627

837899

843178

107942923

107886636

107912729

102627691

102618664

100306293

100776729

100788286

100262793

100266248

100251510

7488359

18099495

7487073

11426069

11422535

25485491

101254996

101258832

101263203

102582300

102605157

102582373

107766568

107799347

107816458

9271366

103633253

103650465

123102309

123110490

123119488

123451922

8076644

100843912

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	2	3	3	2	3	3	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106434775 (bna-r.1 coexpression data)

Top 50 enrichment test to 106434775 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**