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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106434882   DNA-directed RNA polymerase III subunit rpc31 
 bna-r.1   106423224   DNA-directed RNA polymerase III subunit rpc31-like 
 bra-r.6   103853345   DNA-directed RNA polymerase III subunit rpc31 
 ath-u.5   AT4G01590   DNA-directed RNA polymerase III subunit 
 ath-u.5   AT4G35685   DNA-directed RNA polymerase III subunit 
 ghi-r.1   107891146   nucleolar transcription factor 1 
 ghi-r.1   107889584   nucleolar transcription factor 1 
 cit-r.1   102610615   late secretory pathway protein AVL9-like 
 cit-r.1   102623728   WD repeat-containing protein JIP5-like 
 cit-r.1   102614475   uncharacterized LOC102614475 
 gma-u.5   100785693   glutamic acid-rich protein 
 gma-u.5   100804236   glutamic acid-rich protein 
 vvi-u.5   104880228   uncharacterized LOC104880228 
 ppo-u.5   7483552   uncharacterized LOC7483552 
 mtr-u.5   11443721   DNA-directed RNA polymerase III subunit RPC7-like 
 mtr-u.5   11419825   glutamic acid-rich protein 
 sly-u.5   101246067   uncharacterized LOC101246067 
 sot-r.1   102583740   DNA-directed RNA polymerase III subunit RPC7-like 
 sot-r.1   102601956   glutamic acid-rich protein-like 
 nta-r.1   107816093   uncharacterized LOC107816093 
 nta-r.1   107804681   uncharacterized LOC107804681 
 osa-u.5   4343875   uncharacterized LOC4343875 
 zma-u.5   100276973   uncharacterized LOC100276973 
 tae-r.2   123040999   DNA-directed RNA polymerase III subunit rpc31 
 tae-r.2   123052115   glutamic acid-rich protein 
 tae-r.2   123185001   glutamic acid-rich protein 
 hvu-r.1   123429701   glutamic acid-rich protein-like 
 sbi-r.1   8056553   glutamic acid-rich protein 
 bdi-r.1   100844933   glutamic acid-rich protein 

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Top 50 coexpressed genes to 106434882 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106434882 (bna-r.1 coexpression data)

CoexMap"106434882"


bnaLOC106434882 | Entrez gene ID : 106434882    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 2 3 2 1 1 2 1 2 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03020 [list] [network] RNA polymerase (161 genes)
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (76 genes)  IEA  
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (74 genes)  IEA  
GO MF
Protein XP_013731185.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_013731185.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_013731185.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106434882
bna-r.1
for
106423224
bra-r.6
for
103853345
ath-u.5
for
AT4G01590
ath-u.5
for
AT4G35685
ghi-r.1
for
107891146
ghi-r.1
for
107889584
cit-r.1
for
102610615
cit-r.1
for
102623728
cit-r.1
for
102614475
gma-u.5
for
100785693
gma-u.5
for
100804236
vvi-u.5
for
104880228
ppo-u.5
for
7483552
mtr-u.5
for
11443721
mtr-u.5
for
11419825
sly-u.5
for
101246067
sot-r.1
for
102583740
sot-r.1
for
102601956
nta-r.1
for
107816093
nta-r.1
for
107804681
osa-u.5
for
4343875
zma-u.5
for
100276973
tae-r.2
for
123040999
tae-r.2
for
123052115
tae-r.2
for
123185001
hvu-r.1
for
123429701
sbi-r.1
for
8056553
bdi-r.1
for
100844933


Ortholog ID: 6939
Species bna bna bra ath ath ghi ghi cit cit cit gma gma vvi ppo mtr mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106434882 LOC125594029 LOC103853345 AT4G01590 AT4G35685 LOC107891146 LOC107889584 LOC102610615 LOC102623728 LOC102614475 LOC100785693 LOC100804236 LOC104880228 LOC7483552 LOC11443721 LOC11419825 LOC101246067 LOC102583740 LOC102601956 LOC107816093 LOC107804681 LOC4343875 LOC100276973 LOC123040999 LOC123052115 LOC123185001 LOC123429701 LOC8056553 LOC100844933
Function* DNA-directed RNA polymerase III subunit rpc31 DNA-directed RNA polymerase III subunit rpc31-like DNA-directed RNA polymerase III subunit rpc31 DNA-directed RNA polymerase III subunit DNA-directed RNA polymerase III subunit nucleolar transcription factor 1 nucleolar transcription factor 1 late secretory pathway protein AVL9-like WD repeat-containing protein JIP5-like uncharacterized LOC102614475 glutamic acid-rich protein glutamic acid-rich protein uncharacterized LOC104880228 uncharacterized LOC7483552 DNA-directed RNA polymerase III subunit RPC7-like glutamic acid-rich protein uncharacterized LOC101246067 DNA-directed RNA polymerase III subunit RPC7-like glutamic acid-rich protein-like uncharacterized LOC107816093 uncharacterized LOC107804681 uncharacterized LOC4343875 uncharacterized LOC100276973 DNA-directed RNA polymerase III subunit rpc31 glutamic acid-rich protein glutamic acid-rich protein glutamic acid-rich protein-like glutamic acid-rich protein glutamic acid-rich protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 4
bra03010 Ribosome 4
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
gma03020 RNA polymerase 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03020 RNA polymerase 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 3
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106434882 125594029 103853345 828101 829720 107891146 107889584 102610615 102623728 102614475 100785693 100804236 104880228 7483552 11443721 11419825 101246067 102583740 102601956 107816093 107804681 4343875 100276973 123040999 123052115 123185001 123429701 8056553 100844933
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