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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106435485   trimethylguanosine synthase 
 ath-u.5   AT1G30550   S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 
 ath-u.5   AT1G45231   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT1G30545   S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 
 gma-u.5   100782129   trimethylguanosine synthase 
 vvi-u.5   100262697   uncharacterized LOC100262697 
 vvi-u.5   100262065   uncharacterized LOC100262065 
 ppo-u.5   18104882   uncharacterized LOC18104882 
 mtr-u.5   11428036   trimethylguanosine synthase 
 sly-u.5   101266167   uncharacterized LOC101266167 
 sly-u.5   101263590   uncharacterized LOC101263590 
 osa-u.5   4333042   uncharacterized LOC4333042 
 zma-u.5   100277845   uncharacterized LOC100277845 

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Top 50 coexpressed genes to 106435485 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106435485 (bna-r.1 coexpression data)

CoexMap"106435485"


bnaLOC106435485 | Entrez gene ID : 106435485    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 3 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036261 [list] [network] 7-methylguanosine cap hypermethylation  (12 genes)  IEA  
GO:0009452 [list] [network] 7-methylguanosine RNA capping  (27 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0071164 [list] [network] RNA cap trimethylguanosine synthase activity  (12 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013731834.3 [sequence] [blastp]
XP_013731836.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_013731834.3)
nucl 4,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_013731836.3)
Subcellular
localization
TargetP
other 8  (predict for XP_013731834.3)
other 8  (predict for XP_013731836.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106435485

.
ath-u.5
for
AT1G30550

.
ath-u.5
for
AT1G45231

.
ath-u.5
for
AT1G30545

.
gma-u.5
for
100782129

.
vvi-u.5
for
100262697

.
vvi-u.5
for
100262065

.
ppo-u.5
for
18104882

.
mtr-u.5
for
11428036

.
sly-u.5
for
101266167

.
sly-u.5
for
101263590

.
osa-u.5
for
4333042

.
zma-u.5
for
100277845

.


Ortholog ID: 2859
Species ath ath gma sly sly osa zma bra bra vvi vvi ppo mtr hvu hvu ghi bna cre sbi sot sot cit bdi bdi nta nta
Symbol AT1G45231 AT1G30545 LOC100782129 LOC101263590 LOC101266167 LOC4333042 LOC100277845 LOC103868442 LOC103833434 LOC100262697 LOC100262065 LOC18104882 LOC11428036 LOC123408988 LOC123452415 LOC107910222 LOC111210505 CHLRE_06g290800v5 LOC8080440 LOC102588042 LOC102606264 LOC102608303 LOC100828859 LOC100844736 LOC107832327 LOC107819562
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferase superfamily protein trimethylguanosine synthase uncharacterized LOC101263590 uncharacterized LOC101266167 uncharacterized LOC4333042 uncharacterized LOC100277845 trimethylguanosine synthase trimethylguanosine synthase uncharacterized LOC100262697 uncharacterized LOC100262065 uncharacterized LOC18104882 trimethylguanosine synthase trimethylguanosine synthase-like uncharacterized LOC123452415 trimethylguanosine synthase trimethylguanosine synthase-like uncharacterized protein uncharacterized LOC8080440 trimethylguanosine synthase uncharacterized LOC102606264 uncharacterized LOC102608303 trimethylguanosine synthase trimethylguanosine synthase uncharacterized LOC107832327 uncharacterized LOC107819562
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841092 28717281 100782129 101263590 101266167 4333042 100277845 103868442 103833434 100262697 100262065 18104882 11428036 123408988 123452415 107910222 111210505 5721086 8080440 102588042 102606264 102608303 100828859 100844736 107832327 107819562
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