ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106437468	uncharacterized protein DDB_G0284459
ath-u.5	AT3G60380	cotton fiber protein
ath-u.5	AT4G16790	hydroxyproline-rich glycoprotein family protein
gma-u.5	102659662	uncharacterized protein DDB_G0284459
vvi-u.5	104878316	uncharacterized LOC104878316
vvi-u.5	104881830	uncharacterized LOC104881830
ppo-u.5	7483792	uncharacterized LOC7483792
ppo-u.5	7461989	auxilin-related protein 1
mtr-u.5	25497466	uncharacterized LOC25497466
mtr-u.5	11410462	uncharacterized LOC11410462
sly-u.5	101245665	uncharacterized LOC101245665
sly-u.5	104648963	uncharacterized LOC104648963
osa-u.5	4349390	cell wall protein RBR3
zma-u.5	100284853	glycoprotein
zma-u.5	103638926	serine/arginine repetitive matrix protein 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013733815.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 2, E.R. 2, plas 1, cyto_plas 1, mito 1, E.R._vacu 1

(predict for XP_013733815.1)

Subcellular
localization
TargetP

other 8

(predict for XP_013733815.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106437468	ath-u.5 for AT3G60380	ath-u.5 for AT4G16790	gma-u.5 for 102659662	vvi-u.5 for 104878316	vvi-u.5 for 104881830	ppo-u.5 for 7483792	ppo-u.5 for 7461989	mtr-u.5 for 25497466	mtr-u.5 for 11410462	sly-u.5 for 101245665	sly-u.5 for 104648963	osa-u.5 for 4349390	zma-u.5 for 100284853	zma-u.5 for 103638926

Ortholog

Ortholog ID: 2481

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC106403845

peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic

uncharacterized LOC103862884

serine/arginine repetitive matrix protein 1

cotton fiber protein

hydroxyproline-rich glycoprotein family protein

uncharacterized LOC107933703

uncharacterized LOC102607181

uncharacterized LOC102617569

uncharacterized protein DDB_G0284459

uncharacterized LOC104881830

uncharacterized LOC104878316

auxilin-related protein 1

uncharacterized LOC11410462

uncharacterized LOC25497466

uncharacterized LOC104648963

uncharacterized LOC101245665

uncharacterized LOC102597541

uncharacterized LOC107062983

uncharacterized LOC107775760

uncharacterized LOC142178239

cell wall protein RBR3

serine/arginine repetitive matrix protein 1

glycoprotein

serine/arginine repetitive matrix protein 1

protein ENL

protein ENL-like

facilitated trehalose transporter Tret1

serine/arginine repetitive matrix protein 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9
bna00240	Pyrimidine metabolism	4
bna01232	Nucleotide metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00330	Arginine and proline metabolism	2
mtr00360	Phenylalanine metabolism	2
mtr00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4

Expression

Expression pattern

Entrez Gene ID^*

106403845

106445097

103862884

103833978

825209

827385

107933703

102607181

102617569

102659662

104881830

104878316

7461989

11410462

25497466

104648963

101245665

102597541

107062983

107775760

142178239

4349390

103638926

100284853

123181679

123052416

123411734

8055642

100830834

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106437468 (bna-r.1 coexpression data)

Top 50 enrichment test to 106437468 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	1	2	2	2	2	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106437468 (bna-r.1 coexpression data)

Top 50 enrichment test to 106437468 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**