ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106437470	ubiquitin-like domain-containing CTD phosphatase
bna-r.1	106375872	ubiquitin-like domain-containing CTD phosphatase
bra-r.6	103868335	putative WEB family protein At4g17210
ath-u.5	AT4G06599	ubiquitin family protein
ghi-r.1	107927816	ubiquitin-like domain-containing CTD phosphatase
ghi-r.1	107907706	ubiquitin-like domain-containing CTD phosphatase
cit-r.1	102613626	ubiquitin-like domain-containing CTD phosphatase
gma-u.5	100812010	ubiquitin-like domain-containing CTD phosphatase-like
gma-u.5	100785704	ubiquitin-like domain-containing CTD phosphatase-like
vvi-u.5	100262993	ubiquitin-like domain-containing CTD phosphatase
ppo-u.5	7480747	ubiquitin-like domain-containing CTD phosphatase
ppo-u.5	18098281	ubiquitin-like domain-containing CTD phosphatase
mtr-u.5	11408214	ubiquitin-like domain-containing CTD phosphatase
sly-u.5	101247564	ubiquitin-like domain-containing CTD phosphatase
sot-r.1	102598505	ubiquitin-like domain-containing CTD phosphatase
nta-r.1	107791500	ubiquitin-like domain-containing CTD phosphatase
nta-r.1	107763910	ubiquitin-like domain-containing CTD phosphatase
osa-u.5	4324776	ubiquitin-like domain-containing CTD phosphatase
zma-u.5	100282666	uncharacterized LOC100282666
tae-r.2	123062773	ubiquitin-like domain-containing CTD phosphatase
tae-r.2	123079943	ubiquitin-like domain-containing CTD phosphatase
tae-r.2	123071597	ubiquitin-like domain-containing CTD phosphatase
hvu-r.1	123444756	ubiquitin-like domain-containing CTD phosphatase
sbi-r.1	8063118	ubiquitin-like domain-containing CTD phosphatase
bdi-r.1	100845076	ubiquitin-like domain-containing CTD phosphatase
cre-r.1	CHLRE_04g228900v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(9971 genes)

IEA

GO MF

GO:0004721 [list] [network] phosphoprotein phosphatase activity	(473 genes)	IEA
GO:0005515 [list] [network] protein binding	(12789 genes)	IEA

Protein

XP_022573738.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 2, plas 1, cysk_nucl 1

(predict for XP_022573738.1)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for XP_022573738.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106437470	bna-r.1 for 106375872	bra-r.6 for 103868335	ath-u.5 for AT4G06599	ghi-r.1 for 107927816	ghi-r.1 for 107907706	cit-r.1 for 102613626	gma-u.5 for 100812010	gma-u.5 for 100785704	vvi-u.5 for 100262993	ppo-u.5 for 7480747	ppo-u.5 for 18098281	mtr-u.5 for 11408214	sly-u.5 for 101247564	sot-r.1 for 102598505	nta-r.1 for 107791500	nta-r.1 for 107763910	osa-u.5 for 4324776	zma-u.5 for 100282666	tae-r.2 for 123062773	tae-r.2 for 123079943	tae-r.2 for 123071597	hvu-r.1 for 123444756	sbi-r.1 for 8063118	bdi-r.1 for 100845076	cre-r.1 for CHLRE_04g228900v5

Ortholog

Ortholog ID: 9559

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

ubiquitin-like domain-containing CTD phosphatase

putative WEB family protein At4g17210

ubiquitin family protein

ubiquitin-like domain-containing CTD phosphatase

ubiquitin-like domain-containing CTD phosphatase-like

ubiquitin-like domain-containing CTD phosphatase

uncharacterized LOC100282666

ubiquitin-like domain-containing CTD phosphatase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	6
ghi00010	Glycolysis / Gluconeogenesis	3
ghi00562	Inositol phosphate metabolism	3
ghi00340	Histidine metabolism	2
ghi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	6
ghi01230	Biosynthesis of amino acids	4
ghi00010	Glycolysis / Gluconeogenesis	3
ghi00562	Inositol phosphate metabolism	3
ghi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo04141	Protein processing in endoplasmic reticulum	4
ppo03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	2
mtr04120	Ubiquitin mediated proteolysis	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2
sly03020	RNA polymerase	2
sly03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	5
nta04141	Protein processing in endoplasmic reticulum	3
nta00100	Steroid biosynthesis	2
nta03050	Proteasome	2
nta00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	5
nta00100	Steroid biosynthesis	2
nta00190	Oxidative phosphorylation	2
nta00902	Monoterpenoid biosynthesis	2
nta00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma03050	Proteasome	2
zma03008	Ribosome biogenesis in eukaryotes	2
zma04712	Circadian rhythm - plant	2
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	7
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	6
tae03050	Proteasome	5
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	5
tae03060	Protein export	3
tae03250	Viral life cycle - HIV-1	2
tae03272	Virion - Hepatitis viruses	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	8
hvu00071	Fatty acid degradation	2
hvu00280	Valine, leucine and isoleucine degradation	2
hvu01212	Fatty acid metabolism	2
hvu00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	8

Expression

Expression pattern

Entrez Gene ID^*

106437470

106375872

103868335

826068

107927816

107907706

102613626

100812010

100785704

100262993

7480747

18098281

11408214

101247564

102598505

107791500

107763910

4324776

100282666

123062773

123079943

123071597

123444756

8063118

100845076

5717827

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106437470 (bna-r.1 coexpression data)

Top 50 enrichment test to 106437470 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	2	1	2	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106437470 (bna-r.1 coexpression data)

Top 50 enrichment test to 106437470 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**