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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106438307   pentatricopeptide repeat-containing protein At4g21300-like 
 bna-r.1   106406672   pentatricopeptide repeat-containing protein At4g21300-like 
 bna-r.1   106428386   pentatricopeptide repeat-containing protein At4g21300-like 
 bra-r.6   103858936   pentatricopeptide repeat-containing protein At4g21300 
 ath-u.5   AT4G21300   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107951285   pentatricopeptide repeat-containing protein At4g21300 
 ghi-r.1   107910649   pentatricopeptide repeat-containing protein At4g21300 
 cit-r.1   102627502   pentatricopeptide repeat-containing protein At4g21300 
 gma-u.5   100812437   pentatricopeptide repeat-containing protein At4g21300 
 gma-u.5   100806592   pentatricopeptide repeat-containing protein At4g21300 
 vvi-u.5   100264679   pentatricopeptide repeat-containing protein At4g21300 
 ppo-u.5   7489107   pentatricopeptide repeat-containing protein At4g21300 
 mtr-u.5   11411158   pentatricopeptide repeat-containing protein At4g21300 
 sly-u.5   101244251   pentatricopeptide repeat-containing protein 
 sot-r.1   102583979   pentatricopeptide repeat-containing protein At4g21300 
 nta-r.1   107831147   pentatricopeptide repeat-containing protein At4g21300-like 
 nta-r.1   107774047   pentatricopeptide repeat-containing protein At4g21300-like 
 osa-u.5   4334314   pentatricopeptide repeat-containing protein At4g21300 
 zma-u.5   103625830   pentatricopeptide repeat-containing protein At4g21300 
 tae-r.2   123123047   pentatricopeptide repeat-containing protein At4g21300 
 tae-r.2   123113516   pentatricopeptide repeat-containing protein At4g21300 
 tae-r.2   123105259   pentatricopeptide repeat-containing protein At4g21300 
 hvu-r.1   123397188   pentatricopeptide repeat-containing protein At4g21300 
 sbi-r.1   8083933   pentatricopeptide repeat-containing protein At4g21300 
 bdi-r.1   104581838   pentatricopeptide repeat-containing protein At4g21300 

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Top 50 coexpressed genes to 106438307 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106438307 (bna-r.1 coexpression data)

CoexMap"106438307"


bnaLOC106438307 | Entrez gene ID : 106438307    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_022575082.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  E.R. 1  (predict for XP_022575082.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for XP_022575082.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106438307
bna-r.1
for
106406672
bna-r.1
for
106428386
bra-r.6
for
103858936
ath-u.5
for
AT4G21300
ghi-r.1
for
107951285
ghi-r.1
for
107910649
cit-r.1
for
102627502
gma-u.5
for
100812437
gma-u.5
for
100806592
vvi-u.5
for
100264679
ppo-u.5
for
7489107
mtr-u.5
for
11411158
sly-u.5
for
101244251
sot-r.1
for
102583979
nta-r.1
for
107831147
nta-r.1
for
107774047
osa-u.5
for
4334314
zma-u.5
for
103625830
tae-r.2
for
123123047
tae-r.2
for
123113516
tae-r.2
for
123105259
hvu-r.1
for
123397188
sbi-r.1
for
8083933
bdi-r.1
for
104581838


Ortholog ID: 10200
Species bna bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106438307 LOC106406672 LOC106428386 LOC103858936 AT4G21300 LOC107951285 LOC107910649 LOC102627502 LOC100812437 LOC100806592 LOC100264679 LOC7489107 LOC11411158 LOC101244251 LOC102583979 LOC107831147 LOC107774047 LOC4334314 LOC103625830 LOC123123047 LOC123113516 LOC123105259 LOC123397188 LOC8083933 LOC104581838
Function* pentatricopeptide repeat-containing protein At4g21300-like pentatricopeptide repeat-containing protein At4g21300-like pentatricopeptide repeat-containing protein At4g21300-like pentatricopeptide repeat-containing protein At4g21300 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300-like pentatricopeptide repeat-containing protein At4g21300-like pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300 pentatricopeptide repeat-containing protein At4g21300
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 8
sly00280 Valine, leucine and isoleucine degradation 2
sly00650 Butanoate metabolism 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03020 RNA polymerase 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106438307 106406672 106428386 103858936 827878 107951285 107910649 102627502 100812437 100806592 100264679 7489107 11411158 101244251 102583979 107831147 107774047 4334314 103625830 123123047 123113516 123105259 123397188 8083933 104581838
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