ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106438920	uncharacterized LOC106438920
bna-r.1	125575569	uncharacterized LOC125575569
bna-r.1	111215816	uncharacterized LOC111215816
bna-r.1	106355877	transcription initiation factor TFIID subunit 8-like
bra-r.6	103850993	transcription initiation factor TFIID subunit 8
bra-r.6	103870930	uncharacterized LOC103870930
bra-r.6	103858944	uncharacterized LOC103858944
ath-u.5	AT3G02160	Bromodomain transcription factor
ath-u.5	TAF8	TBP-associated factor 8
ath-u.5	AT5G15570	Bromodomain transcription factor
ghi-r.1	107889589	transcription initiation factor TFIID subunit 8
ghi-r.1	107898804	transcription initiation factor TFIID subunit 8
ghi-r.1	107934328	transcription initiation factor TFIID subunit 8
cit-r.1	102611692	transcription initiation factor TFIID subunit 8
cit-r.1	102630337	transcription initiation factor TFIID subunit 8
gma-u.5	100810245	transcription initiation factor TFIID subunit 8
gma-u.5	100815889	transcription initiation factor TFIID subunit 8
gma-u.5	100778098	transcription initiation factor TFIID subunit 8
vvi-u.5	100260255	transcription initiation factor TFIID subunit 8
vvi-u.5	100246447	transcription initiation factor TFIID subunit 8
ppo-u.5	7480583	transcription initiation factor TFIID subunit 8
ppo-u.5	7484577	transcription initiation factor TFIID subunit 8
ppo-u.5	18100163	transcription initiation factor TFIID subunit 8
mtr-u.5	25497546	transcription initiation factor TFIID subunit 8
mtr-u.5	25485118	transcription initiation factor TFIID subunit 8
sly-u.5	101264247	transcription initiation factor TFIID subunit 8
sot-r.1	102603303	transcription initiation factor TFIID subunit 8
nta-r.1	107814805	transcription initiation factor TFIID subunit 8-like
nta-r.1	107823814	transcription initiation factor TFIID subunit 8-like
nta-r.1	107794151	transcription initiation factor TFIID subunit 8-like
osa-u.5	4333405	transcription initiation factor TFIID subunit 8
zma-u.5	103650604	transcription initiation factor TFIID subunit 8
zma-u.5	109944834	transcription initiation factor TFIID subunit 8
tae-r.2	123110669	transcription initiation factor TFIID subunit 8
tae-r.2	123102508	transcription initiation factor TFIID subunit 8
tae-r.2	123119674	transcription initiation factor TFIID subunit 8
hvu-r.1	123398503	transcription initiation factor TFIID subunit 8-like
hvu-r.1	123407998	transcription initiation factor TFIID subunit 8-like
sbi-r.1	8084207	transcription initiation factor TFIID subunit 8
bdi-r.1	100844124	transcription initiation factor TFIID subunit 8
cre-r.1	CHLRE_06g297550v5	uncharacterized protein

Top 50 coexpressed genes to 106438920 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106438920 (bna-r.1 coexpression data)

CoexMap"106438920"

[Cytoscape]

Annotation

functional annotation

KEGG

bna03022 [list] [network] Basal transcription factors (161 genes)

GO BP

GO CC

GO:0005669 [list] [network] transcription factor TFIID complex

(56 genes)

IEA

GO MF

GO:0046982 [list] [network] protein heterodimerization activity

(268 genes)

IEA

Protein

XP_048632153.1 [sequence] [blastp]
XP_048632154.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1, extr 1, cysk 1	(predict for XP_048632153.1)
nucl 8, cyto 1, extr 1, cysk 1	(predict for XP_048632154.1)

Subcellular
localization
TargetP

other 4	(predict for XP_048632153.1)
other 4	(predict for XP_048632154.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106438920	bna-r.1 for 125575569	bna-r.1 for 111215816	bna-r.1 for 106355877	bra-r.6 for 103850993	bra-r.6 for 103870930	bra-r.6 for 103858944	ath-u.5 for AT3G02160	ath-u.5 for TAF8	ath-u.5 for AT5G15570	ghi-r.1 for 107889589	ghi-r.1 for 107898804	ghi-r.1 for 107934328	cit-r.1 for 102611692	cit-r.1 for 102630337	gma-u.5 for 100810245	gma-u.5 for 100815889	gma-u.5 for 100778098	vvi-u.5 for 100260255	vvi-u.5 for 100246447	ppo-u.5 for 7480583	ppo-u.5 for 7484577	ppo-u.5 for 18100163	mtr-u.5 for 25497546	mtr-u.5 for 25485118	sly-u.5 for 101264247	sot-r.1 for 102603303	nta-r.1 for 107814805	nta-r.1 for 107823814	nta-r.1 for 107794151	osa-u.5 for 4333405	zma-u.5 for 103650604	zma-u.5 for 109944834	tae-r.2 for 123110669	tae-r.2 for 123102508	tae-r.2 for 123119674	hvu-r.1 for 123398503	hvu-r.1 for 123407998	sbi-r.1 for 8084207	bdi-r.1 for 100844124	cre-r.1 for CHLRE_06g297550v5

Ortholog

Ortholog ID: 2641

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

TAF8

Function^*

uncharacterized LOC106438920

transcription initiation factor TFIID subunit 8-like