ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106440526	beta-adaptin-like protein C
ath-u.5	AT4G11380	Adaptin family protein
ath-u.5	AT4G23460	Adaptin family protein
gma-u.5	100807007	beta-adaptin-like protein C
gma-u.5	100784577	beta-adaptin-like protein C
gma-u.5	100777522	beta-adaptin-like protein C
vvi-u.5	100241708	beta-adaptin-like protein B
ppo-u.5	7479302	beta-adaptin-like protein C
ppo-u.5	7458190	beta-adaptin-like protein B
mtr-u.5	11443257	beta-adaptin-like protein C
sly-u.5	101252011	beta-adaptin-like protein C
osa-u.5	4332864	beta-adaptin-like protein C
zma-u.5	103639126	beta-adaptin-like protein C
zma-u.5	103634981	beta-adaptin-like protein C

functional annotation

KEGG

bna04142 [list] [network] Lysosome (242 genes)

GO BP

GO:0006886 [list] [network] intracellular protein transport	(894 genes)	IEA
GO:0016192 [list] [network] vesicle-mediated transport	(1457 genes)	IEA

GO CC

GO:0030131 [list] [network] clathrin adaptor complex	(46 genes)	IEA
GO:0030117 [list] [network] membrane coat	(235 genes)	IEA

GO MF

GO:0030276 [list] [network] clathrin binding

(121 genes)

IEA

Protein

XP_048618796.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, mito 1, vacu 1, pero 1, cysk 1

(predict for XP_048618796.1)

Subcellular
localization
TargetP

other 9

(predict for XP_048618796.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106440526	ath-u.5 for AT4G11380	ath-u.5 for AT4G23460	gma-u.5 for 100807007	gma-u.5 for 100784577	gma-u.5 for 100777522	vvi-u.5 for 100241708	ppo-u.5 for 7479302	ppo-u.5 for 7458190	mtr-u.5 for 11443257	sly-u.5 for 101252011	osa-u.5 for 4332864	zma-u.5 for 103639126	zma-u.5 for 103634981

Ortholog ID: 6603

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

beta-adaptin-like protein C

beta-adaptin-like protein B

beta-adaptin-like protein C

Adaptin family protein

beta-adaptin-like protein B

beta-adaptin-like protein C

beta-adaptin-like protein B

beta-adaptin-like protein C

beta-adaptin-like protein B

beta-adaptin-like protein C

beta-adaptin-like protein B

beta-adaptin-like protein C

beta-adaptin-like protein B

beta-adaptin-like protein C

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna00010	Glycolysis / Gluconeogenesis	2
bna00020	Citrate cycle (TCA cycle)	2
bna00620	Pyruvate metabolism	2
bna00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna04144	Endocytosis	2
bna00010	Glycolysis / Gluconeogenesis	2
bna00020	Citrate cycle (TCA cycle)	2
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	6
ath04142	Lysosome	4
ath05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	4
ath04141	Protein processing in endoplasmic reticulum	3
ath04144	Endocytosis	3
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi04142	Lysosome	3
ghi05100	Bacterial invasion of epithelial cells	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04142	Lysosome	3
ghi05100	Bacterial invasion of epithelial cells	2
ghi00270	Cysteine and methionine metabolism	2
ghi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit04144	Endocytosis	3
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi04144	Endocytosis	2
vvi01200	Carbon metabolism	2
vvi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	4
ppo04144	Endocytosis	4
ppo00541	Biosynthesis of various nucleotide sugars	4
ppo01250	Biosynthesis of nucleotide sugars	4
ppo05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	4
ppo04144	Endocytosis	4
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3
sly04145	Phagosome	3
sly04144	Endocytosis	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	5
sot04142	Lysosome	4
sot04141	Protein processing in endoplasmic reticulum	3
sot05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04142	Lysosome	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04142	Lysosome	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	4
osa04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	6
zma04144	Endocytosis	5
zma05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	7
tae04144	Endocytosis	4
tae05100	Bacterial invasion of epithelial cells	4
tae00562	Inositol phosphate metabolism	2
tae04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	6
tae03015	mRNA surveillance pathway	3
tae04382	Cornified envelope formation	3
tae04144	Endocytosis	3
tae05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	4
hvu03015	mRNA surveillance pathway	2
hvu04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	3
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	5
cre04142	Lysosome	3

Expression

Expression pattern

Entrez Gene ID^*

106440526

106422371

103833875

103861398

828445

826741

121215594

107941520

102621964

100777522

100807007

100241708

7479302

7458190

11443257

101252011

102590622

107805886

107832035

4332864

103634981

103639126

123086170

123097478

123448610

8155720

100836681

5722887

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106440526 (bna-r.1 coexpression data)

Top 50 enrichment test to 106440526 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	3	1	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106440526 (bna-r.1 coexpression data)

Top 50 enrichment test to 106440526 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**