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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106440824   E3 ubiquitin-protein ligase SINAT4 
 ath-u.5   AT2G41980   Protein with RING/U-box and TRAF-like domain 
 ath-u.5   SINAT2   uncharacterized protein 
 ath-u.5   AT3G61790   Protein with RING/U-box and TRAF-like domain 
 gma-u.5   100813966   E3 ubiquitin-protein ligase SINAT2-like 
 gma-u.5   100810573   E3 ubiquitin-protein ligase SINAT3-like 
 gma-u.5   100793457   E3 ubiquitin-protein ligase DIS1 
 vvi-u.5   100244678   E3 ubiquitin-protein ligase DIS1 
 vvi-u.5   100267231   E3 ubiquitin-protein ligase SINAT2 
 vvi-u.5   100252009   E3 ubiquitin-protein ligase SINAT5 
 ppo-u.5   7463600   E3 ubiquitin-protein ligase SINAT2 
 ppo-u.5   7476852   E3 ubiquitin-protein ligase DIS1 
 ppo-u.5   7479519   E3 ubiquitin-protein ligase SINAT2 
 mtr-u.5   25500674   E3 ubiquitin-protein ligase SINAT3 
 mtr-u.5   25499735   E3 ubiquitin-protein ligase SINAT5 
 mtr-u.5   25483549   E3 ubiquitin-protein ligase SINAT2 
 sly-u.5   SINA4   E3 ubiquitin ligase SINA4 
 sly-u.5   101253831   E3 ubiquitin ligase SINA2 
 sly-u.5   101264159   E3 ubiquitin ligase SINA6 
 osa-u.5   9266295   E3 ubiquitin-protein ligase DIS1-like 
 osa-u.5   4327774   E3 ubiquitin-protein ligase SINAT5 
 osa-u.5   4344172   E3 ubiquitin-protein ligase DIS1-like 
 zma-u.5   100170241   uncharacterized LOC100170241 
 zma-u.5   100170242   uncharacterized LOC100170242 
 zma-u.5   100170243   uncharacterized LOC100170243 

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Top 50 coexpressed genes to 106440824 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106440824 (bna-r.1 coexpression data)

CoexMap"106440824"


bnaLOC106440824 | Entrez gene ID : 106440824    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO:0007275 [list] [network] multicellular organism development  (716 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (910 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013738038.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  nucl_plas 2,  mito 1  (predict for XP_013738038.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013738038.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106440824

.
ath-u.5
for
AT2G41980

.
ath-u.5
for
SINAT2

.
ath-u.5
for
AT3G61790

.
gma-u.5
for
100813966

.
gma-u.5
for
100810573

.
gma-u.5
for
100793457

.
vvi-u.5
for
100244678

.
vvi-u.5
for
100267231

.
vvi-u.5
for
100252009

.
ppo-u.5
for
7463600

.
ppo-u.5
for
7476852

.
ppo-u.5
for
7479519

.
mtr-u.5
for
25500674

.
mtr-u.5
for
25499735

.
mtr-u.5
for
25483549

.
sly-u.5
for
SINA4

.
sly-u.5
for
101253831

.
sly-u.5
for
101264159

.
osa-u.5
for
9266295

.
osa-u.5
for
4327774

.
osa-u.5
for
4344172

.
zma-u.5
for
100170241

.
zma-u.5
for
100170242

.
zma-u.5
for
100170243

.


Ortholog ID: 342
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G61790 AT5G53360 LOC100810573 LOC100500061 LOC101246723 LOC101264159 LOC4338181 LOC4327774 LOC100170241 LOC100170242 LOC103862812 LOC103867677 LOC100252009 LOC100233084 LOC7455750 LOC25500674 LOC25483549 LOC123077898 LOC123165457 LOC123428647 LOC123443282 LOC107916308 LOC107940377 LOC106428173 LOC111215125 LOC8080816 LOC8058290 LOC102599941 LOC102602506 LOC102619672 LOC102623798 LOC100833057 LOC100832893 LOC107794971 LOC107784733
Function* Protein with RING/U-box and TRAF-like domain TRAF-like superfamily protein E3 ubiquitin-protein ligase SINAT3-like E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin ligase SINA3 E3 ubiquitin ligase SINA6 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 uncharacterized LOC100170241 uncharacterized LOC100170242 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT4 E3 ubiquitin-protein ligase SINAT5 SINA1p E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase DIS1 putative E3 ubiquitin-protein ligase SINAT1 putative E3 ubiquitin-protein ligase SINAT1 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT3-like E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 2
sly04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00220 Arginine biosynthesis 2
bna00230 Purine metabolism 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00280 Valine, leucine and isoleucine degradation 2
bna00640 Propanoate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 4
sot01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04814 Motor proteins 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
nta00310 Lysine degradation 2
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825352 835417 100810573 100500061 101246723 101264159 4338181 4327774 100170241 100170242 103862812 103867677 100252009 100233084 7455750 25500674 25483549 123077898 123165457 123428647 123443282 107916308 107940377 106428173 111215125 8080816 8058290 102599941 102602506 102619672 102623798 100833057 100832893 107794971 107784733
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