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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106443649   ATP-dependent RNA helicase DBP3-like 
 bna-r.1   106433605   ATP-dependent RNA helicase DBP3 
 ath-u.5   AT2G28600   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ghi-r.1   107950199   ATP-dependent RNA helicase DBP3 
 cit-r.1   102629442   DEAD-box ATP-dependent RNA helicase 5 
 gma-u.5   100809099   pre-mRNA-processing ATP-dependent RNA helicase prp5 
 vvi-u.5   100260841   uncharacterized LOC100260841 
 vvi-u.5   109123768   uncharacterized LOC109123768 
 ppo-u.5   7455505   pre-mRNA-processing ATP-dependent RNA helicase PRP5 
 mtr-u.5   11424303   pre-mRNA-processing ATP-dependent RNA helicase prp5 
 sly-u.5   101253955   DEAD-box ATP-dependent RNA helicase 5 
 sot-r.1   102578489   uncharacterized LOC102578489 
 nta-r.1   107760729   uncharacterized LOC107760729 
 nta-r.1   107802981   uncharacterized LOC107802981 
 osa-u.5   4351499   DEAD-box ATP-dependent RNA helicase 5-like 
 osa-u.5   9270769   uncharacterized LOC9270769 
 zma-u.5   100284481   ATP-dependent RNA helicase 
 tae-r.2   123096632   probable ATP-dependent RNA helicase ddx5 
 tae-r.2   123091685   probable ATP-dependent RNA helicase ddx5 
 tae-r.2   123086358   probable ATP-dependent RNA helicase ddx5 
 hvu-r.1   123448162   probable ATP-dependent RNA helicase ddx5 
 sbi-r.1   8074878   probable ATP-dependent RNA helicase ddx5 
 bdi-r.1   100844213   probable ATP-dependent RNA helicase ddx5 

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Top 50 coexpressed genes to 106443649 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106443649 (bna-r.1 coexpression data)

CoexMap"106443649"


bnaLOC106443649 | Entrez gene ID : 106443649    
Species bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre
Paralog 2 1 1 1 1 2 1 1 1 1 2 2 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034063 [list] [network] stress granule assembly  (34 genes)  IEA  
GO:0033962 [list] [network] P-body assembly  (48 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (42 genes)  IEA  
GO:0000932 [list] [network] P-body  (160 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013740654.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  E.R. 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_013740654.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013740654.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106443649
bna-r.1
for
106433605
ath-u.5
for
AT2G28600
ghi-r.1
for
107950199
cit-r.1
for
102629442
gma-u.5
for
100809099
vvi-u.5
for
100260841
vvi-u.5
for
109123768
ppo-u.5
for
7455505
mtr-u.5
for
11424303
sly-u.5
for
101253955
sot-r.1
for
102578489
nta-r.1
for
107760729
nta-r.1
for
107802981
osa-u.5
for
4351499
osa-u.5
for
9270769
zma-u.5
for
100284481
tae-r.2
for
123096632
tae-r.2
for
123091685
tae-r.2
for
123086358
hvu-r.1
for
123448162
sbi-r.1
for
8074878
bdi-r.1
for
100844213


Ortholog ID: 10682
Species bna bna ath ghi cit gma vvi vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi
Symbol LOC106443649 LOC106433605 AT2G28600 LOC107950199 LOC102629442 LOC100809099 LOC100260841 LOC109123768 LOC7455505 LOC11424303 LOC101253955 LOC102578489 LOC107760729 LOC107802981 LOC4351499 LOC9270769 LOC100284481 LOC123096632 LOC123091685 LOC123086358 LOC123448162 LOC8074878 LOC100844213
Function* ATP-dependent RNA helicase DBP3-like ATP-dependent RNA helicase DBP3 P-loop containing nucleoside triphosphate hydrolases superfamily protein ATP-dependent RNA helicase DBP3 DEAD-box ATP-dependent RNA helicase 5 pre-mRNA-processing ATP-dependent RNA helicase prp5 uncharacterized LOC100260841 uncharacterized LOC109123768 pre-mRNA-processing ATP-dependent RNA helicase PRP5 pre-mRNA-processing ATP-dependent RNA helicase prp5 DEAD-box ATP-dependent RNA helicase 5 uncharacterized LOC102578489 uncharacterized LOC107760729 uncharacterized LOC107802981 DEAD-box ATP-dependent RNA helicase 5-like uncharacterized LOC9270769 ATP-dependent RNA helicase probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5 probable ATP-dependent RNA helicase ddx5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106443649 106433605 817408 107950199 102629442 100809099 100260841 109123768 7455505 11424303 101253955 102578489 107760729 107802981 4351499 9270769 100284481 123096632 123091685 123086358 123448162 8074878 100844213
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