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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445117   pentatricopeptide repeat-containing protein At3g60050 
 ath-u.5   AT3G60050   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT1G55630   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100805547   pentatricopeptide repeat-containing protein At3g60050 
 gma-u.5   100792512   pentatricopeptide repeat-containing protein At3g60050 
 vvi-u.5   100255723   pentatricopeptide repeat-containing protein At1g55630 
 ppo-u.5   7454512   pentatricopeptide repeat-containing protein At1g55630 
 mtr-u.5   25496345   pentatricopeptide repeat-containing protein At3g60050 
 mtr-u.5   25485065   pentatricopeptide repeat-containing protein At1g55630 
 sly-u.5   101255741   pentatricopeptide repeat-containing protein At3g60050-like 
 osa-u.5   4349063   pentatricopeptide repeat-containing protein At3g60050 
 zma-u.5   100273731   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 106445117 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445117 (bna-r.1 coexpression data)

CoexMap"106445117"


bnaLOC106445117 | Entrez gene ID : 106445117    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 2 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013742079.3 [sequence] [blastp]
XP_048609636.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_013742079.3)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_048609636.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_013742079.3)
mito 6  (predict for XP_048609636.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445117
ath-u.5
for
AT3G60050
ath-u.5
for
AT1G55630
gma-u.5
for
100805547
gma-u.5
for
100792512
vvi-u.5
for
100255723
ppo-u.5
for
7454512
mtr-u.5
for
25496345
mtr-u.5
for
25485065
sly-u.5
for
101255741
osa-u.5
for
4349063
zma-u.5
for
100273731


Ortholog ID: 8065
Species bna bna bra bra ath ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106345778 LOC106445117 LOC103871030 LOC103862916 AT1G55630 AT3G60050 LOC107943475 LOC107936904 LOC102609350 LOC100805547 LOC100792512 LOC100255723 LOC7454512 LOC25485065 LOC25496345 LOC101255741 LOC102596322 LOC107813020 LOC107788224 LOC4349063 LOC100273731 LOC123048206 LOC123181188 LOC123433805 LOC8067072 LOC100830027
Function* pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630-like pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At1g55630-like pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At1g55630 pentatricopeptide repeat-containing protein At3g60050-like pentatricopeptide repeat-containing protein At3g60050 pentatricopeptide repeat-containing protein At3g60050
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106345778 106445117 103871030 103862916 842012 825175 107943475 107936904 102609350 100805547 100792512 100255723 7454512 25485065 25496345 101255741 102596322 107813020 107788224 4349063 100273731 123048206 123181188 123433805 8067072 100830027
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