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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445463   protein SHI RELATED SEQUENCE 6-like 
 gma-u.5   100790311   protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5   18094338   protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5   7460242   protein SHI RELATED SEQUENCE 6 
 mtr-u.5   11445184   protein LATERAL ROOT PRIMORDIUM 1 

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Top 50 coexpressed genes to 106445463 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445463 (bna-r.1 coexpression data)

CoexMap"106445463"


bnaLOC106445463 | Entrez gene ID : 106445463    
Species bna gma ppo mtr cre ghi cit vvi hvu sly bdi bra sot sbi tae ath nta zma osa
Paralog 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (935 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013742486.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 2,  nucl 1,  cyto 1,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_013742486.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_013742486.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445463

.
gma-u.5
for
100790311

.
ppo-u.5
for
18094338

.
ppo-u.5
for
7460242

.
mtr-u.5
for
11445184

.


Ortholog ID: 13436
Species gma bra bra ppo ppo mtr ghi ghi bna bna
Symbol LOC100790311 LOC103841356 LOC103863234 LOC18094338 LOC7460242 LOC11445184 LOC107896388 LOC107915152 LOC106413880 LOC106415444
Function* protein LATERAL ROOT PRIMORDIUM 1 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein LATERAL ROOT PRIMORDIUM 1 protein SHI RELATED SEQUENCE 6 protein LATERAL ROOT PRIMORDIUM 1 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6-like protein SHI RELATED SEQUENCE 5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100790311 103841356 103863234 18094338 7460242 11445184 107896388 107915152 106413880 106415444
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