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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445775   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 bna-r.1   106440708   pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like 
 bra-r.6   103863383   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 ath-u.5   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107899292   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 cit-r.1   102608249   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 gma-u.5   100807932   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 vvi-u.5   100256760   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 ppo-u.5   7479044   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 mtr-u.5   25484125   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 sly-u.5   101264147   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 sot-r.1   102585429   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 nta-r.1   107783828   uncharacterized LOC107783828 
 nta-r.1   107816765   uncharacterized LOC107816765 
 osa-u.5   4333379   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 zma-u.5   100383543   Pentatricopeptide repeat-containing protein chloroplastic 
 tae-r.2   123122746   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 tae-r.2   123113238   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 tae-r.2   123104937   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 hvu-r.1   123397125   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 sbi-r.1   8065663   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 bdi-r.1   100836179   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 

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Top 50 coexpressed genes to 106445775 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445775 (bna-r.1 coexpression data)

CoexMap"106445775"


bnaLOC106445775 | Entrez gene ID : 106445775    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013742860.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_013742860.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013742860.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445775
bna-r.1
for
106440708
bra-r.6
for
103863383
ath-u.5
for
MEE40
ghi-r.1
for
107899292
cit-r.1
for
102608249
gma-u.5
for
100807932
vvi-u.5
for
100256760
ppo-u.5
for
7479044
mtr-u.5
for
25484125
sly-u.5
for
101264147
sot-r.1
for
102585429
nta-r.1
for
107783828
nta-r.1
for
107816765
osa-u.5
for
4333379
zma-u.5
for
100383543
tae-r.2
for
123122746
tae-r.2
for
123113238
tae-r.2
for
123104937
hvu-r.1
for
123397125
sbi-r.1
for
8065663
bdi-r.1
for
100836179


Ortholog ID: 11694
Species bna bna bra ath ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106445775 LOC106440708 LOC103863383 MEE40 LOC107899292 LOC102608249 LOC100807932 LOC100256760 LOC7479044 LOC25484125 LOC101264147 LOC102585429 LOC107783828 LOC107816765 LOC4333379 LOC100383543 LOC123122746 LOC123113238 LOC123104937 LOC123397125 LOC8065663 LOC100836179
Function* pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like pentatricopeptide repeat-containing protein At3g53700, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic uncharacterized LOC107783828 uncharacterized LOC107816765 pentatricopeptide repeat-containing protein At3g53700, chloroplastic Pentatricopeptide repeat-containing protein chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At3g53700, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00220 Arginine biosynthesis 2
cit00240 Pyrimidine metabolism 2
cit00250 Alanine, aspartate and glutamate metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae03010 Ribosome 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106445775 106440708 103863383 824537 107899292 102608249 100807932 100256760 7479044 25484125 101264147 102585429 107783828 107816765 4333379 100383543 123122746 123113238 123104937 123397125 8065663 100836179
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