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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106446391   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 bra-r.6   103870940   DNA-(apurinic or apyrimidinic site) lyase 2 
 ath-u.5   AT4G36050   endonuclease/exonuclease/phosphatase family protein 
 ghi-r.1   107912988   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 ghi-r.1   107912813   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 cit-r.1   102619750   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 gma-u.5   121173723   DNA-(apurinic or apyrimidinic site) endonuclease 2-like 
 gma-u.5   100811022   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 gma-u.5   100781120   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 vvi-u.5   100264349   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 ppo-u.5   18101085   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 mtr-u.5   11443192   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 sly-u.5   101246406   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 sot-r.1   102587879   DNA-(apurinic or apyrimidinic site) lyase 2 
 nta-r.1   107812644   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 nta-r.1   107786040   DNA-(apurinic or apyrimidinic site) endonuclease 2-like 
 osa-u.5   4347697   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 zma-u.5   103633096   DNA-(apurinic or apyrimidinic site) lyase 2 
 tae-r.2   123104597   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 tae-r.2   123112864   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 tae-r.2   123122366   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 hvu-r.1   123400136   DNA-(apurinic or apyrimidinic site) endonuclease 2 
 sbi-r.1   8070906   DNA-(apurinic or apyrimidinic site) lyase 2 
 bdi-r.1   100830878   DNA-(apurinic or apyrimidinic site) lyase 2 
 cre-r.1   CHLRE_12g532750v5   uncharacterized protein 

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Top 50 coexpressed genes to 106446391 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106446391 (bna-r.1 coexpression data)

CoexMap"106446391"


bnaLOC106446391 | Entrez gene ID : 106446391    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 1 3 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006284 [list] [network] base-excision repair  (68 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008311 [list] [network] double-stranded DNA 3'-5' DNA exonuclease activity  (9 genes)  IEA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (15 genes)  IEA  
GO:0008081 [list] [network] phosphoric diester hydrolase activity  (169 genes)  IEA  
GO:0004519 [list] [network] endonuclease activity  (1036 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013743596.1 [sequence] [blastp]
XP_013743672.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  cysk 1,  chlo_mito 1  (predict for XP_013743596.1)
nucl 10  (predict for XP_013743672.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_013743596.1)
other 8  (predict for XP_013743672.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106446391
bra-r.6
for
103870940
ath-u.5
for
AT4G36050
ghi-r.1
for
107912988
ghi-r.1
for
107912813
cit-r.1
for
102619750
gma-u.5
for
121173723
gma-u.5
for
100811022
gma-u.5
for
100781120
vvi-u.5
for
100264349
ppo-u.5
for
18101085
mtr-u.5
for
11443192
sly-u.5
for
101246406
sot-r.1
for
102587879
nta-r.1
for
107812644
nta-r.1
for
107786040
osa-u.5
for
4347697
zma-u.5
for
103633096
tae-r.2
for
123104597
tae-r.2
for
123112864
tae-r.2
for
123122366
hvu-r.1
for
123400136
sbi-r.1
for
8070906
bdi-r.1
for
100830878
cre-r.1
for
CHLRE_12g532750v5


Ortholog ID: 9064
Species bna bra ath ghi ghi cit gma gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106446391 LOC103870940 AT4G36050 LOC107912988 LOC107912813 LOC102619750 LOC121173723 LOC100811022 LOC100781120 LOC100264349 LOC18101085 LOC11443192 LOC101246406 LOC102587879 LOC107812644 LOC107786040 LOC4347697 LOC103633096 LOC123104597 LOC123112864 LOC123122366 LOC123400136 LOC8070906 LOC100830878 CHLRE_12g532750v5
Function* DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) lyase 2 endonuclease/exonuclease/phosphatase family protein DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2-like DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) lyase 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2-like DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) lyase 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) endonuclease 2 DNA-(apurinic or apyrimidinic site) lyase 2 DNA-(apurinic or apyrimidinic site) lyase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
hvu00260 Glycine, serine and threonine metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04146 Peroxisome 2
cre00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106446391 103870940 829761 107912988 107912813 102619750 121173723 100811022 100781120 100264349 18101085 11443192 101246406 102587879 107812644 107786040 4347697 103633096 123104597 123112864 123122366 123400136 8070906 100830878 5718547
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