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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106447275   PH, RCC1 and FYVE domains-containing protein 1 
 bna-r.1   106418678   PH, RCC1 and FYVE domains-containing protein 1-like 
 bna-r.1   106355434   PH, RCC1 and FYVE domains-containing protein 1 
 bna-r.1   106354640   PH, RCC1 and FYVE domains-containing protein 1 
 bra-r.6   103830587   PH, RCC1 and FYVE domains-containing protein 1 
 bra-r.6   103831580   PH, RCC1 and FYVE domains-containing protein 1 
 bra-r.6   103832150   PH, RCC1 and FYVE domains-containing protein 1 
 ath-u.5   AT5G42140   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ath-u.5   PRAF1   Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 
 ghi-r.1   107940983   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   107914119   PH, RCC1 and FYVE domains-containing protein 1 
 ghi-r.1   107910441   PH, RCC1 and FYVE domains-containing protein 1 
 cit-r.1   102627137   PH, RCC1 and FYVE domains-containing protein 1-like 
 gma-u.5   100813700   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100811999   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100805364   PH, RCC1 and FYVE domains-containing protein 1 
 vvi-u.5   100246114   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   7467827   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   7469211   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   25496065   PH, RCC1 and FYVE domains-containing protein 1 
 mtr-u.5   11420473   PH, RCC1 and FYVE domains-containing protein 1 
 sly-u.5   101260719   PH, RCC1 and FYVE domains-containing protein 1 
 sot-r.1   102604257   uncharacterized LOC102604257 
 nta-r.1   107760172   PH, RCC1 and FYVE domains-containing protein 1 
 nta-r.1   107767647   PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5   4337567   PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5   4324462   PH, RCC1 and FYVE domains-containing protein 1 
 osa-u.5   4337469   PH, RCC1 and FYVE domains-containing protein 1 
 zma-u.5   103636262   PH, RCC1 and FYVE domains-containing protein 1 
 zma-u.5   100304223   uncharacterized LOC100304223 
 zma-u.5   100381412   uncharacterized LOC100381412 
 tae-r.2   123103647   PH, RCC1 and FYVE domains-containing protein 1 
 tae-r.2   123047517   PH, RCC1 and FYVE domains-containing protein 1 
 tae-r.2   123055312   PH, RCC1 and FYVE domains-containing protein 1 
 hvu-r.1   123428495   PH, RCC1 and FYVE domains-containing protein 1-like 
 hvu-r.1   123430202   PH, RCC1 and FYVE domains-containing protein 1-like 
 hvu-r.1   123445625   PH, RCC1 and FYVE domains-containing protein 1-like 
 sbi-r.1   8068646   uncharacterized LOC8068646 
 sbi-r.1   8076503   uncharacterized LOC8076503 
 sbi-r.1   8077416   E3 ubiquitin-protein ligase HERC2 
 bdi-r.1   100835494   PH, RCC1 and FYVE domains-containing protein 1 
 bdi-r.1   100832036   PH, RCC1 and FYVE domains-containing protein 1 
 bdi-r.1   100833487   PH, RCC1 and FYVE domains-containing protein 1 

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Top 50 coexpressed genes to 106447275 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106447275 (bna-r.1 coexpression data)

CoexMap""


bnaLOC106447275 | Entrez gene ID : 106447275    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 1 3 1 2 2 1 1 2 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function PH, RCC1 and FYVE domains-containing protein 1
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
Protein XP_013744619.1 [sequence] [blastp]
XP_022558966.1 [sequence] [blastp]
XP_022558968.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013744619.1)
nucl 9  (predict for XP_022558966.1)
nucl 9  (predict for XP_022558968.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013744619.1)
other 8  (predict for XP_022558966.1)
other 8  (predict for XP_022558968.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106447275
bna-r.1
for
106418678
bna-r.1
for
106355434
bna-r.1
for
106354640
bra-r.6
for
103830587
bra-r.6
for
103831580
bra-r.6
for
103832150
ath-u.5
for
AT5G42140
ath-u.5
for
PRAF1
ghi-r.1
for
107940983
ghi-r.1
for
107914119
ghi-r.1
for
107910441
cit-r.1
for
102627137
gma-u.5
for
100813700
gma-u.5
for
100811999
gma-u.5
for
100805364
vvi-u.5
for
100246114
ppo-u.5
for
7467827
ppo-u.5
for
7469211
mtr-u.5
for
25496065
mtr-u.5
for
11420473
sly-u.5
for
101260719
sot-r.1
for
102604257
nta-r.1
for
107760172
nta-r.1
for
107767647
osa-u.5
for
4337567
osa-u.5
for
4324462
osa-u.5
for
4337469
zma-u.5
for
103636262
zma-u.5
for
100304223
zma-u.5
for
100381412
tae-r.2
for
123103647
tae-r.2
for
123047517
tae-r.2
for
123055312
hvu-r.1
for
123428495
hvu-r.1
for
123430202
hvu-r.1
for
123445625
sbi-r.1
for
8068646
sbi-r.1
for
8076503
sbi-r.1
for
8077416
bdi-r.1
for
100835494
bdi-r.1
for
100832036
bdi-r.1
for
100833487

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Ortholog ID: 3148
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC106447275 LOC106354640 LOC106353494 LOC103830587 LOC103831580 LOC103832150 AT5G42140 PRAF1 LOC107940983 LOC107914119 LOC107910441 LOC102627137 LOC100813700 LOC100783270 LOC106796458 LOC100246114 LOC7467827 LOC7469211 LOC25496065 LOC11420473 LOC101260719 LOC102604257 LOC107760172 LOC107767647 LOC4337567 LOC4324462 LOC4337469 LOC103636262 LOC100304223 LOC100381412 LOC123047517 LOC123063587 LOC123185726 LOC123428495 LOC123430202 LOC123445625 LOC8068646 LOC8076503 LOC8077416 LOC100835494 LOC100832036 LOC100833487
Function* PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 uncharacterized LOC102604257 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 uncharacterized LOC100304223 uncharacterized LOC100381412 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1-like PH, RCC1 and FYVE domains-containing protein 1-like uncharacterized LOC8068646 uncharacterized LOC8076503 E3 ubiquitin-protein ligase HERC2 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot04142 Lysosome 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106447275 106354640 106353494 103830587 103831580 103832150 834219 844030 107940983 107914119 107910441 102627137 100813700 100783270 106796458 100246114 7467827 7469211 25496065 11420473 101260719 102604257 107760172 107767647 4337567 4324462 4337469 103636262 100304223 100381412 123047517 123063587 123185726 123428495 123430202 123445625 8068646 8076503 8077416 100835494 100832036 100833487
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