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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106450245   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 ath-u.5   CCB4   cofactor assembly of complex C 
 gma-u.5   100776666   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 vvi-u.5   100255235   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 ppo-u.5   7469068   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 mtr-u.5   11407612   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 sly-u.5   101258059   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 osa-u.5   4337227   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 
 zma-u.5   109943949   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic 

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Top 50 coexpressed genes to 106450245 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106450245 (bna-r.1 coexpression data)

CoexMap"106450245"


bnaLOC106450245 | Entrez gene ID : 106450245    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010190 [list] [network] cytochrome b6f complex assembly  (9 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
Protein XP_013747349.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 3,  E.R. 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_013747349.2)
Subcellular
localization
TargetP
scret 5,  chlo 4  (predict for XP_013747349.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106450245
ath-u.5
for
CCB4
gma-u.5
for
100776666
vvi-u.5
for
100255235
ppo-u.5
for
7469068
mtr-u.5
for
11407612
sly-u.5
for
101258059
osa-u.5
for
4337227
zma-u.5
for
109943949


Ortholog ID: 9854
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma hvu sbi bdi cre
Symbol LOC106450245 LOC125575303 LOC103829302 CCB4 LOC107903687 LOC107886314 LOC102610709 LOC100776666 LOC100255235 LOC7469068 LOC11407612 LOC101258059 LOC102594748 LOC107778599 LOC107799032 LOC4337227 LOC109943949 LOC123428131 LOC8079594 LOC100836599 CHLRE_08g382300v5
Function* protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic-like protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic cofactor assembly of complex C protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic-like protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 3
gma00620 Pyruvate metabolism 2
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly00260 Glycine, serine and threonine metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
cre00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106450245 125575303 103829302 842278 107903687 107886314 102610709 100776666 100255235 7469068 11407612 101258059 102594748 107778599 107799032 4337227 109943949 123428131 8079594 100836599 5719843
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