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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106453086   mediator of RNA polymerase II transcription subunit 14 
 ath-u.5   SWP   RNA polymerase II transcription mediator 
 gma-u.5   100797588   mediator of RNA polymerase II transcription subunit 14 
 gma-u.5   100783484   mediator of RNA polymerase II transcription subunit 14 
 vvi-u.5   100267561   mediator of RNA polymerase II transcription subunit 14 
 ppo-u.5   18098970   mediator of RNA polymerase II transcription subunit 14 
 ppo-u.5   7487671   mediator of RNA polymerase II transcription subunit 14-like 
 mtr-u.5   25499680   mediator of RNA polymerase II transcription subunit 14 
 mtr-u.5   11414438   mediator of RNA polymerase II transcription subunit 14-like 
 sly-u.5   101261458   mediator of RNA polymerase II transcription subunit 14 
 osa-u.5   4345299   mediator of RNA polymerase II transcription subunit 14 
 osa-u.5   4346616   mediator of RNA polymerase II transcription subunit 14 
 zma-u.5   100279374   Mediator of RNA polymerase II transcription subunit 14 

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Top 50 coexpressed genes to 106453086 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106453086 (bna-r.1 coexpression data)

CoexMap"106453086"


bnaLOC106453086 | Entrez gene ID : 106453086    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (19 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (379 genes)  IEA  
Protein XP_013750773.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  E.R. 1,  cyto_E.R. 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cysk_plas 1,  mito_plas 1  (predict for XP_013750773.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013750773.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106453086

.
ath-u.5
for
SWP

.
gma-u.5
for
100797588

.
gma-u.5
for
100783484

.
vvi-u.5
for
100267561

.
ppo-u.5
for
18098970

.
ppo-u.5
for
7487671

.
mtr-u.5
for
25499680

.
mtr-u.5
for
11414438

.
sly-u.5
for
101261458

.
osa-u.5
for
4345299

.
osa-u.5
for
4346616

.
zma-u.5
for
100279374

.


Ortholog ID: 6535
Species ath gma gma sly osa osa zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol SWP LOC100783484 LOC100797588 LOC101261458 LOC4345299 LOC4346616 LOC100279374 LOC103849141 LOC100267561 LOC18098970 LOC7487671 LOC25499680 LOC11414438 LOC123044895 LOC123052617 LOC123398659 LOC123426010 LOC107899159 LOC107894950 LOC106427401 LOC106453086 CHLRE_03g190550v5 LOC8067996 LOC8063476 LOC102583398 LOC102616264 LOC100829137 LOC107784304 LOC107828476
Function* RNA polymerase II transcription mediator mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 Mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14-like mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14-like mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14-like mediator of RNA polymerase II transcription subunit 14-like mediator of RNA polymerase II transcription subunit 14-like mediator of RNA polymerase II transcription subunit 14-like mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 uncharacterized protein mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14 mediator of RNA polymerase II transcription subunit 14-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04075 Plant hormone signal transduction 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 4
bna04075 Plant hormone signal transduction 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819634 100783484 100797588 101261458 4345299 4346616 100279374 103849141 100267561 18098970 7487671 25499680 11414438 123044895 123052617 123398659 123426010 107899159 107894950 106427401 106453086 66052937 8067996 8063476 102583398 102616264 100829137 107784304 107828476
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