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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106453254   pre-rRNA-processing protein ESF1 
 bna-r.1   125587590   pre-rRNA-processing protein ESF1-like 
 bra-r.6   103870952   pre-rRNA-processing protein ESF1 
 ath-u.5   AT3G01160   pre-rRNA-processing ESF1-like protein 
 ghi-r.1   107959652   pre-rRNA-processing protein ESF1 
 ghi-r.1   107959697   pre-rRNA-processing protein ESF1 
 ghi-r.1   121203574   pre-rRNA-processing protein esf1 
 cit-r.1   102611917   pre-rRNA-processing protein esf1 
 gma-u.5   100788064   pre-rRNA-processing protein esf1 
 gma-u.5   100785167   pre-rRNA-processing protein esf1 
 vvi-u.5   100254034   pre-rRNA-processing protein ESF1 
 ppo-u.5   18099140   pre-rRNA-processing protein esf1 
 mtr-u.5   11411854   pre-rRNA-processing protein ESF1 
 sly-u.5   101268053   pre-rRNA-processing protein ESF1 
 sot-r.1   102602551   pre-rRNA-processing protein ESF1 
 nta-r.1   107793663   pre-rRNA-processing protein esf1 
 nta-r.1   107791849   pre-rRNA-processing protein esf1 
 osa-u.5   4343456   pre-rRNA-processing protein ESF1 
 zma-u.5   100278378   Pre-rRNA-processing protein esf1 
 tae-r.2   123052529   pre-rRNA-processing protein ESF1 
 hvu-r.1   123425834   pre-rRNA-processing protein ESF1-like 
 sbi-r.1   8084070   pre-rRNA-processing protein ESF1 
 bdi-r.1   100837852   pre-rRNA-processing protein ESF1 
 cre-r.1   CHLRE_10g452500v5   uncharacterized protein 

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Top 50 coexpressed genes to 106453254 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106453254 (bna-r.1 coexpression data)

CoexMap"106453254"


bnaLOC106453254 | Entrez gene ID : 106453254    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 1 1 1 1 2 1 1 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013750977.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013750977.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013750977.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106453254
bna-r.1
for
125587590
bra-r.6
for
103870952
ath-u.5
for
AT3G01160
ghi-r.1
for
107959652
ghi-r.1
for
107959697
ghi-r.1
for
121203574
cit-r.1
for
102611917
gma-u.5
for
100788064
gma-u.5
for
100785167
vvi-u.5
for
100254034
ppo-u.5
for
18099140
mtr-u.5
for
11411854
sly-u.5
for
101268053
sot-r.1
for
102602551
nta-r.1
for
107793663
nta-r.1
for
107791849
osa-u.5
for
4343456
zma-u.5
for
100278378
tae-r.2
for
123052529
hvu-r.1
for
123425834
sbi-r.1
for
8084070
bdi-r.1
for
100837852
cre-r.1
for
CHLRE_10g452500v5


Ortholog ID: 6551
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol LOC106453254 LOC125587590 LOC103870952 AT3G01160 LOC107959652 LOC107959697 LOC121203574 LOC102611917 LOC100788064 LOC100785167 LOC100254034 LOC18099140 LOC11411854 LOC101268053 LOC102602551 LOC107793663 LOC107791849 LOC4343456 LOC100278378 LOC123044638 LOC123425834 LOC8084070 LOC100837852 CHLRE_10g452500v5
Function* pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1-like pre-rRNA-processing protein ESF1 pre-rRNA-processing ESF1-like protein pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 Pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1-like pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106453254 125587590 103870952 820504 107959652 107959697 121203574 102611917 100788064 100785167 100254034 18099140 11411854 101268053 102602551 107793663 107791849 4343456 100278378 123044638 123425834 8084070 100837852 5724078
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