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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g452500v5   uncharacterized protein 
 ath-u.5   AT3G01160   pre-rRNA-processing ESF1-like protein 
 gma-u.5   100788064   pre-rRNA-processing protein esf1 
 gma-u.5   100785167   pre-rRNA-processing protein esf1 
 sly-u.5   101268053   pre-rRNA-processing protein ESF1 
 osa-u.5   4343456   pre-rRNA-processing protein ESF1 
 zma-u.5   100278378   Pre-rRNA-processing protein esf1 
 vvi-u.5   100254034   pre-rRNA-processing protein ESF1 
 ppo-u.5   18099140   pre-rRNA-processing protein esf1 
 mtr-u.5   11411854   pre-rRNA-processing protein ESF1 

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Top 50 coexpressed genes to CHLRE_10g452500v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g452500v5 (cre-r.1 coexpression data)

CoexMap"5724078"


creCHLRE_10g452500v5 | Entrez gene ID : 5724078      
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001698341.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_001698341.1)
Subcellular
localization
TargetP
other 8  (predict for XP_001698341.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g452500v5

.
ath-u.5
for
AT3G01160

.
gma-u.5
for
100788064

.
gma-u.5
for
100785167

.
sly-u.5
for
101268053

.
osa-u.5
for
4343456

.
zma-u.5
for
100278378

.
vvi-u.5
for
100254034

.
ppo-u.5
for
18099140

.
mtr-u.5
for
11411854

.


Ortholog ID: 6551
Species ath gma gma sly osa zma bra vvi ppo tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G01160 LOC100785167 LOC100788064 LOC101268053 LOC4343456 LOC100278378 LOC103870952 LOC100254034 LOC18099140 LOC123044638 LOC123425834 LOC107959652 LOC121203574 LOC106453254 LOC125587590 CHLRE_10g452500v5 LOC8084070 LOC102602551 LOC102611917 LOC100837852 LOC107791849 LOC107793663
Function* pre-rRNA-processing ESF1-like protein pre-rRNA-processing protein esf1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 Pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1-like pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1-like uncharacterized protein pre-rRNA-processing protein ESF1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein ESF1 pre-rRNA-processing protein esf1 pre-rRNA-processing protein esf1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820504 100785167 100788064 101268053 4343456 100278378 103870952 100254034 18099140 123044638 123425834 107959652 121203574 106453254 125587590 5724078 8084070 102602551 102611917 100837852 107791849 107793663
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