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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106454016   probable rRNA-processing protein EBP2 homolog 
 ath-u.5   AT3G22660   rRNA processing protein-like protein 
 gma-u.5   100805013   probable rRNA-processing protein EBP2 homolog 
 gma-u.5   100782432   probable rRNA-processing protein EBP2 homolog 
 vvi-u.5   100249807   probable rRNA-processing protein EBP2 homolog 
 ppo-u.5   7476764   probable rRNA-processing protein EBP2 homolog 
 mtr-u.5   11438688   probable rRNA-processing protein EBP2 homolog 
 mtr-u.5   11416706   probable rRNA-processing protein EBP2 homolog 
 sly-u.5   101264660   probable rRNA-processing protein EBP2 homolog 
 sly-u.5   101264962   probable rRNA-processing protein EBP2 homolog 
 osa-u.5   4343215   probable rRNA-processing protein EBP2 homolog 
 zma-u.5   100502519   putative rRNA-processing protein EBP2-like protein 
 zma-u.5   100382121   uncharacterized LOC100382121 

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Top 50 coexpressed genes to 106454016 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106454016 (bna-r.1 coexpression data)

CoexMap"106454016"


bnaLOC106454016 | Entrez gene ID : 106454016    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (285 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO CC
GO:0034399 [list] [network] nuclear periphery  (9 genes)  IEA  
GO:0030687 [list] [network] preribosome, large subunit precursor  (103 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
Protein XP_013751658.1 [sequence] [blastp]
XP_048593086.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  extr 1  (predict for XP_013751658.1)
nucl 9,  plas 1,  extr 1  (predict for XP_048593086.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013751658.1)
other 8  (predict for XP_048593086.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106454016

.
ath-u.5
for
AT3G22660

.
gma-u.5
for
100805013

.
gma-u.5
for
100782432

.
vvi-u.5
for
100249807

.
ppo-u.5
for
7476764

.
mtr-u.5
for
11438688

.
mtr-u.5
for
11416706

.
sly-u.5
for
101264660

.
sly-u.5
for
101264962

.
osa-u.5
for
4343215

.
zma-u.5
for
100502519

.
zma-u.5
for
100382121

.


Ortholog ID: 5313
Species ath gma gma sly sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol AT3G22660 LOC100782432 LOC100805013 LOC101264660 LOC101264962 LOC4343215 LOC100382121 LOC100502519 LOC103834407 LOC103869018 LOC100249807 LOC7476764 LOC11438688 LOC11416706 LOC123166846 LOC123093454 LOC123449673 LOC107933169 LOC107953661 LOC106454016 LOC106347026 CHLRE_07g351750v5 LOC8065699 LOC8077280 LOC102580308 LOC102583550 LOC102622504 LOC100843947 LOC107806245 LOC107770919
Function* rRNA processing protein-like protein probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog uncharacterized LOC100382121 putative rRNA-processing protein EBP2-like protein probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog uncharacterized protein probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog putative rRNA-processing protein EBP2 homolog putative rRNA-processing protein EBP2 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna01232 Nucleotide metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821837 100782432 100805013 101264660 101264962 4343215 100382121 100502519 103834407 103869018 100249807 7476764 11438688 11416706 123166846 123093454 123449673 107933169 107953661 106454016 106347026 5718074 8065699 8077280 102580308 102583550 102622504 100843947 107806245 107770919
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