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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111214191   probable rRNA-processing protein EBP2 homolog 
 bna-r.1   106454016   probable rRNA-processing protein EBP2 homolog 
 bna-r.1   106451771   probable rRNA-processing protein EBP2 homolog 
 bna-r.1   106423449   probable rRNA-processing protein EBP2 homolog 
 bra-r.6   103834407   probable rRNA-processing protein EBP2 homolog 
 bra-r.6   103859967   probable rRNA-processing protein EBP2 homolog 
 bra-r.6   103869018   probable rRNA-processing protein EBP2 homolog 
 ath-u.5   AT3G22660   rRNA processing protein-like protein 
 ghi-r.1   107953661   probable rRNA-processing protein EBP2 homolog 
 ghi-r.1   107933169   probable rRNA-processing protein EBP2 homolog 
 cit-r.1   102622504   probable rRNA-processing protein EBP2 homolog 
 gma-u.5   100805013   probable rRNA-processing protein EBP2 homolog 
 gma-u.5   100782432   probable rRNA-processing protein EBP2 homolog 
 vvi-u.5   100249807   probable rRNA-processing protein EBP2 homolog 
 ppo-u.5   7476764   probable rRNA-processing protein EBP2 homolog 
 mtr-u.5   11438688   probable rRNA-processing protein EBP2 homolog 
 mtr-u.5   11416706   probable rRNA-processing protein EBP2 homolog 
 sly-u.5   101264660   probable rRNA-processing protein EBP2 homolog 
 sly-u.5   101264962   probable rRNA-processing protein EBP2 homolog 
 sot-r.1   102580308   probable rRNA-processing protein EBP2 homolog 
 sot-r.1   102583550   probable rRNA-processing protein EBP2 homolog 
 nta-r.1   107830196   putative rRNA-processing protein EBP2 homolog 
 nta-r.1   107806245   putative rRNA-processing protein EBP2 homolog 
 nta-r.1   107770919   putative rRNA-processing protein EBP2 homolog 
 osa-u.5   4343215   probable rRNA-processing protein EBP2 homolog 
 zma-u.5   100502519   putative rRNA-processing protein EBP2-like protein 
 zma-u.5   100382121   uncharacterized LOC100382121 
 tae-r.2   123088102   probable rRNA-processing protein EBP2 homolog 
 tae-r.2   123093454   probable rRNA-processing protein EBP2 homolog 
 tae-r.2   123166846   probable rRNA-processing protein EBP2 homolog 
 hvu-r.1   123449673   probable rRNA-processing protein EBP2 homolog 
 sbi-r.1   8065699   probable rRNA-processing protein EBP2 homolog 
 sbi-r.1   8077280   probable rRNA-processing protein EBP2 homolog 
 bdi-r.1   100843947   probable rRNA-processing protein EBP2 homolog 
 cre-r.1   CHLRE_07g351750v5   uncharacterized protein 

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Top 50 coexpressed genes to 111214191 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111214191 (bna-r.1 coexpression data)

CoexMap"111214191"


bnaLOC111214191 | Entrez gene ID : 111214191    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 2 1 2 1 1 2 2 2 3 1 2 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (285 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO CC
GO:0034399 [list] [network] nuclear periphery  (9 genes)  IEA  
GO:0030687 [list] [network] preribosome, large subunit precursor  (103 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
Protein XP_022572310.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  extr 1  (predict for XP_022572310.1)
Subcellular
localization
TargetP
other 8  (predict for XP_022572310.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111214191
bna-r.1
for
106454016
bna-r.1
for
106451771
bna-r.1
for
106423449
bra-r.6
for
103834407
bra-r.6
for
103859967
bra-r.6
for
103869018
ath-u.5
for
AT3G22660
ghi-r.1
for
107953661
ghi-r.1
for
107933169
cit-r.1
for
102622504
gma-u.5
for
100805013
gma-u.5
for
100782432
vvi-u.5
for
100249807
ppo-u.5
for
7476764
mtr-u.5
for
11438688
mtr-u.5
for
11416706
sly-u.5
for
101264660
sly-u.5
for
101264962
sot-r.1
for
102580308
sot-r.1
for
102583550
nta-r.1
for
107830196
nta-r.1
for
107806245
nta-r.1
for
107770919
osa-u.5
for
4343215
zma-u.5
for
100502519
zma-u.5
for
100382121
tae-r.2
for
123088102
tae-r.2
for
123093454
tae-r.2
for
123166846
hvu-r.1
for
123449673
sbi-r.1
for
8065699
sbi-r.1
for
8077280
bdi-r.1
for
100843947
cre-r.1
for
CHLRE_07g351750v5


Ortholog ID: 5313
Species bna bna bna bra bra bra ath ghi ghi cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC106454016 LOC106395412 LOC106347026 LOC103834407 LOC103859967 LOC103869018 AT3G22660 LOC107953661 LOC107933169 LOC102622504 LOC100805013 LOC100782432 LOC100249807 LOC7476764 LOC11438688 LOC11416706 LOC101264660 LOC101264962 LOC102580308 LOC102583550 LOC107830196 LOC107806245 LOC107770919 LOC4343215 LOC100502519 LOC100382121 LOC123088102 LOC123093454 LOC123166846 LOC123449673 LOC8065699 LOC8077280 LOC100843947 CHLRE_07g351750v5
Function* probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog rRNA processing protein-like protein probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog putative rRNA-processing protein EBP2 homolog putative rRNA-processing protein EBP2 homolog putative rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog putative rRNA-processing protein EBP2-like protein uncharacterized LOC100382121 probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog probable rRNA-processing protein EBP2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna01232 Nucleotide metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106454016 106395412 106347026 103834407 103859967 103869018 821837 107953661 107933169 102622504 100805013 100782432 100249807 7476764 11438688 11416706 101264660 101264962 102580308 102583550 107830196 107806245 107770919 4343215 100502519 100382121 123088102 123093454 123166846 123449673 8065699 8077280 100843947 5718074
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