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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   106797956   malate dehydrogenase 1, glyoxysomal-like 
 gma-r.7   106797956   malate dehydrogenase 1, glyoxysomal-like 
 gma-u.5   100500610   thioredoxin superfamily protein 
 gma-u.5   100306216   thioredoxin superfamily protein 
 mtr-u.5   11441719   peroxiredoxin Q, chloroplastic 
 ppo-u.5   7455648   peroxiredoxin Q, chloroplastic 
 ppo-u.5   7490532   peroxiredoxin Q, chloroplastic 
 ath-u.5   PRXQ   Thioredoxin superfamily protein 
 vvi-u.5   100250698   peroxiredoxin Q 
 sly-u.5   101243905   peroxiredoxin Q, chloroplastic 
 osa-u.5   4340391   putative peroxiredoxin Q, chloroplastic 
 zma-u.5   100283690   peroxiredoxin bcp 

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Top 50 coexpressed genes to 106797956 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106797956 (gma-u.5 coexpression data)

CoexMap"106797956"


gmaLOC106797956 | Entrez gene ID : 106797956    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00020 [list] [network] Citrate cycle (TCA cycle) (103 genes)
gmx00270 [list] [network] Cysteine and methionine metabolism (212 genes)
gmx00566 [list] [network] Sulfoquinovose metabolism (20 genes)
gmx00620 [list] [network] Pyruvate metabolism (209 genes)
gmx00630 [list] [network] Glyoxylate and dicarboxylate metabolism (134 genes)
gmx00710 [list] [network] Carbon fixation by Calvin cycle (130 genes)
gmx01200 [list] [network] Carbon metabolism (489 genes)
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0030060 [list] [network] L-malate dehydrogenase (NAD+) activity  (14 genes)  IEA  
GO:0016209 [list] [network] antioxidant activity  (272 genes)  IEA  
Protein XP_040870338.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  plas 2  (predict for XP_040870338.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040870338.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
106797956

.
gma-r.7
for
106797956

.
gma-u.5
for
100500610

.
gma-u.5
for
100306216

.
mtr-u.5
for
11441719

.
ppo-u.5
for
7455648

.
ppo-u.5
for
7490532

.
ath-u.5
for
PRXQ

.
vvi-u.5
for
100250698

.
sly-u.5
for
101243905

.
osa-u.5
for
4340391

.
zma-u.5
for
100283690

.


Ortholog ID: 8484
Species ath gma sly osa zma bra vvi ppo ppo mtr ghi ghi bna bna cre cre sbi sot cit nta nta
Symbol PRXQ LOC100306216 LOC101243905 LOC4340391 LOC100283690 LOC103854405 LOC100250698 LOC7455648 LOC7490532 LOC11441719 LOC121204781 LOC107932808 LOC106436659 LOC125575770 CHLRE_02g114600v5 CHLRE_02g095069v5 LOC8077303 LOC102589036 LOC102620446 LOC107805477 LOC107805800
Function* Thioredoxin superfamily protein thioredoxin superfamily protein peroxiredoxin Q, chloroplastic putative peroxiredoxin Q, chloroplastic peroxiredoxin bcp peroxiredoxin Q, chloroplastic peroxiredoxin Q peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic-like uncharacterized protein uncharacterized protein peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
vvi00196 Photosynthesis - antenna proteins 6
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo00196 Photosynthesis - antenna proteins 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot01200 Carbon metabolism 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 5
nta01240 Biosynthesis of cofactors 3
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00620 Pyruvate metabolism 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822203 100306216 101243905 4340391 100283690 103854405 100250698 7455648 7490532 11441719 121204781 107932808 106436659 125575770 5725212 5727714 8077303 102589036 102620446 107805477 107805800
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