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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107759173   uncharacterized LOC107759173 
 nta-r.1   107815973   uncharacterized LOC107815973 
 nta-r.1   107806721   uncharacterized LOC107806721 
 nta-r.1   107762934   translation initiation factor eIF-2B subunit beta-like 
 sly-u.5   101258004   uncharacterized LOC101258004 
 sly-u.5   101266888   uncharacterized LOC101266888 
 sot-r.1   102580093   translation initiation factor eIF-2B subunit beta-like 
 sot-r.1   102590114   translation initiation factor eIF-2B subunit beta-like 
 ath-u.5   AT3G07300   NagB/RpiA/CoA transferase-like superfamily protein 
 gma-u.5   100807877   translation initiation factor eIF-2B subunit beta 
 gma-u.5   100801044   translation initiation factor eIF-2B subunit beta 
 gma-u.5   100778545   translation initiation factor eIF-2B subunit beta 
 bra-r.6   103849359   translation initiation factor eIF-2B subunit beta 
 bra-r.6   103870682   translation initiation factor eIF-2B subunit beta 
 vvi-u.5   100256712   uncharacterized LOC100256712 
 ppo-u.5   112327014   uncharacterized LOC112327014 
 ppo-u.5   7462782   uncharacterized LOC7462782 
 mtr-u.5   11407357   translation initiation factor eIF-2B subunit beta 
 ghi-r.1   107904723   translation initiation factor eIF-2B subunit beta 
 ghi-r.1   107904422   translation initiation factor eIF-2B subunit beta 
 bna-r.1   111206237   translation initiation factor eIF-2B subunit beta-like 
 bna-r.1   106452954   translation initiation factor eIF-2B subunit beta 
 bna-r.1   106451264   translation initiation factor eIF-2B subunit beta-like 
 cit-r.1   102618607   uncharacterized LOC102618607 
 cit-r.1   102624845   uncharacterized LOC102624845 
 osa-u.5   4348536   translation initiation factor eIF-2B subunit beta 
 zma-u.5   100283019   translation initiation factor eIF-2B beta subunit 
 zma-u.5   100191235   uncharacterized LOC100191235 
 tae-r.2   123180878   translation initiation factor eIF-2B subunit beta 
 tae-r.2   123117906   translation initiation factor eIF-2B subunit beta 
 tae-r.2   123043971   translation initiation factor eIF-2B subunit beta 
 hvu-r.1   123429238   translation initiation factor eIF-2B subunit beta 
 sbi-r.1   110431656   translation initiation factor eIF-2B subunit beta 
 bdi-r.1   100826572   translation initiation factor eIF-2B subunit beta 
 cre-r.1   CHLRE_16g662902v5   uncharacterized protein 

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Top 50 coexpressed genes to 107759173 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107759173 (nta-r.1 coexpression data)

CoexMap"107759173"


ntaLOC107759173 | Entrez gene ID : 107759173      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 3 2 1 2 1 2 3 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (106 genes)  IEA  
GO CC
GO:0005851 [list] [network] eukaryotic translation initiation factor 2B complex  (11 genes)  IEA  
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (72 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (138 genes)  IEA  
Protein XP_016432534.1 [sequence] [blastp]
XP_016432535.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 3  (predict for XP_016432534.1)
cyto 6,  pero 3  (predict for XP_016432535.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016432534.1)
other 6  (predict for XP_016432535.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107759173
nta-r.1
for
107815973
nta-r.1
for
107806721
nta-r.1
for
107762934
sly-u.5
for
101258004
sly-u.5
for
101266888
sot-r.1
for
102580093
sot-r.1
for
102590114
ath-u.5
for
AT3G07300
gma-u.5
for
100807877
gma-u.5
for
100801044
gma-u.5
for
100778545
bra-r.6
for
103849359
bra-r.6
for
103870682
vvi-u.5
for
100256712
ppo-u.5
for
112327014
ppo-u.5
for
7462782
mtr-u.5
for
11407357
ghi-r.1
for
107904723
ghi-r.1
for
107904422
bna-r.1
for
111206237
bna-r.1
for
106452954
bna-r.1
for
106451264
cit-r.1
for
102618607
cit-r.1
for
102624845
osa-u.5
for
4348536
zma-u.5
for
100283019
zma-u.5
for
100191235
tae-r.2
for
123180878
tae-r.2
for
123117906
tae-r.2
for
123043971
hvu-r.1
for
123429238
sbi-r.1
for
110431656
bdi-r.1
for
100826572
cre-r.1
for
CHLRE_16g662902v5


Ortholog ID: 5290
Species nta nta nta sly sly sot sot ath gma gma gma bra bra vvi ppo ppo ppo mtr ghi ghi bna bna bna cit cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107759173 LOC107815973 LOC107806721 LOC101258004 LOC101266888 LOC102580093 LOC102590114 AT3G07300 LOC100807877 LOC100801044 LOC100778545 LOC103849359 LOC103870682 LOC100256712 LOC112327014 LOC7462782 LOC7487011 LOC11407357 LOC107904723 LOC107904422 LOC111206237 LOC106451264 LOC125601820 LOC102618607 LOC102624845 LOC4348536 LOC100283019 LOC100191235 LOC123180878 LOC123117906 LOC123043971 LOC123429238 LOC110431656 LOC100826572 CHLRE_16g662902v5
Function* uncharacterized LOC107759173 uncharacterized LOC107815973 uncharacterized LOC107806721 uncharacterized LOC101258004 uncharacterized LOC101266888 translation initiation factor eIF-2B subunit beta-like translation initiation factor eIF-2B subunit beta-like NagB/RpiA/CoA transferase-like superfamily protein translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta uncharacterized LOC100256712 uncharacterized LOC112327014 uncharacterized LOC7462782 uncharacterized LOC7487011 translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta-like translation initiation factor eIF-2B subunit beta-like translation initiation factor eIF-2B subunit beta-like uncharacterized LOC102618607 uncharacterized LOC102624845 translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B beta subunit uncharacterized LOC100191235 translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04712 Circadian rhythm - plant 2
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00020 Citrate cycle (TCA cycle) 2
gma00270 Cysteine and methionine metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 4
gma01200 Carbon metabolism 4
gma00020 Citrate cycle (TCA cycle) 3
gma00270 Cysteine and methionine metabolism 3
gma00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107759173 107815973 107806721 101258004 101266888 102580093 102590114 819918 100807877 100801044 100778545 103849359 103870682 100256712 112327014 7462782 7487011 11407357 107904723 107904422 111206237 106451264 125601820 102618607 102624845 4348536 100283019 100191235 123180878 123117906 123043971 123429238 110431656 100826572 5723514
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