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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_16g662902v5   uncharacterized protein 
 ath-u.5   AT3G07300   NagB/RpiA/CoA transferase-like superfamily protein 
 gma-u.5   100807877   translation initiation factor eIF-2B subunit beta 
 gma-u.5   100801044   translation initiation factor eIF-2B subunit beta 
 gma-u.5   100778545   translation initiation factor eIF-2B subunit beta 
 sly-u.5   101266888   uncharacterized LOC101266888 
 sly-u.5   101258004   uncharacterized LOC101258004 
 osa-u.5   4348536   translation initiation factor eIF-2B subunit beta 
 zma-u.5   100191235   uncharacterized LOC100191235 
 zma-u.5   100283019   translation initiation factor eIF-2B beta subunit 
 vvi-u.5   100256712   uncharacterized LOC100256712 
 ppo-u.5   7462782   uncharacterized LOC7462782 
 ppo-u.5   112327014   uncharacterized LOC112327014 
 mtr-u.5   11407357   translation initiation factor eIF-2B subunit beta 

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Top 50 coexpressed genes to CHLRE_16g662902v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_16g662902v5 (cre-r.1 coexpression data)

CoexMap"5723514"


creCHLRE_16g662902v5 | Entrez gene ID : 5723514    
Species cre ath gma sly osa zma vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta tae
Paralog 1 1 3 2 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (30 genes)  IEA  
GO CC
GO:0005851 [list] [network] eukaryotic translation initiation factor 2B complex  (5 genes)  IEA  
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (25 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (37 genes)  IEA  
Protein XP_042915661.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  chlo 1,  pero 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_042915661.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042915661.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_16g662902v5
ath-u.5
for
AT3G07300
gma-u.5
for
100807877
gma-u.5
for
100801044
gma-u.5
for
100778545
sly-u.5
for
101266888
sly-u.5
for
101258004
osa-u.5
for
4348536
zma-u.5
for
100191235
zma-u.5
for
100283019
vvi-u.5
for
100256712
ppo-u.5
for
7462782
ppo-u.5
for
112327014
mtr-u.5
for
11407357


Ortholog ID: 5290
Species cre ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol CHLRE_16g662902v5 AT3G07300 LOC100801044 LOC100778545 LOC101258004 LOC101266888 LOC4348536 LOC100191235 LOC100283019 LOC103849359 LOC103870682 LOC100256712 LOC7487011 LOC112327014 LOC11407357 LOC123180878 LOC123117906 LOC123429238 LOC107904422 LOC107904723 LOC125601820 LOC106451264 LOC110431656 LOC102580093 LOC102590114 LOC102624845 LOC102618607 LOC100826572 LOC107806721 LOC107815973
Function* uncharacterized protein NagB/RpiA/CoA transferase-like superfamily protein translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta uncharacterized LOC101258004 uncharacterized LOC101266888 translation initiation factor eIF-2B subunit beta uncharacterized LOC100191235 translation initiation factor eIF-2B beta subunit translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta uncharacterized LOC100256712 uncharacterized LOC7487011 uncharacterized LOC112327014 translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta-like translation initiation factor eIF-2B subunit beta-like translation initiation factor eIF-2B subunit beta translation initiation factor eIF-2B subunit beta-like translation initiation factor eIF-2B subunit beta-like uncharacterized LOC102624845 uncharacterized LOC102618607 translation initiation factor eIF-2B subunit beta uncharacterized LOC107806721 uncharacterized LOC107815973
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00020 Citrate cycle (TCA cycle) 2
gma00270 Cysteine and methionine metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 4
gma01200 Carbon metabolism 4
gma00020 Citrate cycle (TCA cycle) 3
gma00270 Cysteine and methionine metabolism 3
gma00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04712 Circadian rhythm - plant 2
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00650 Butanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5723514 819918 100801044 100778545 101258004 101266888 4348536 100191235 100283019 103849359 103870682 100256712 7487011 112327014 11407357 123180878 123117906 123429238 107904422 107904723 125601820 106451264 110431656 102580093 102590114 102624845 102618607 100826572 107806721 107815973
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