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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107765953   putative CRM domain-containing protein At3g25440, chloroplastic 
 nta-r.1   107775408   putative CRM domain-containing protein At3g25440, chloroplastic 
 nta-r.1   107810846   putative CRM domain-containing protein At3g25440, chloroplastic 
 nta-r.1   107768930   putative CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101259346   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sot-r.1   102593888   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ath-u.5   LOH1   RNA-binding CRS1 / YhbY (CRM) domain protein 
 gma-u.5   100790692   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 gma-u.5   100775770   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bra-r.6   103828555   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 vvi-u.5   100252435   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ppo-u.5   7469379   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 mtr-u.5   11429426   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107922770   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bna-r.1   106366679   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 bna-r.1   BNACNNG00400D   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 cit-r.1   102620415   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 osa-u.5   4336259   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 zma-u.5   100193495   RNA-binding CRS1 / YhbY (CRM) domain protein 
 tae-r.2   123189618   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 tae-r.2   123045866   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 hvu-r.1   123427094   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sbi-r.1   8073713   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bdi-r.1   100821999   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 

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Top 50 coexpressed genes to 107765953 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107765953 (nta-r.1 coexpression data)

CoexMap"107765953"


ntaLOC107765953 | Entrez gene ID : 107765953      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 1 1 1 1 2 1 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_016440138.2 [sequence] [blastp]
XP_075099561.1 [sequence] [blastp]
XP_075099562.1 [sequence] [blastp]
XP_075099563.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016440138.2)
chlo 9  (predict for XP_075099561.1)
chlo 8,  nucl 2  (predict for XP_075099562.1)
chlo 8,  nucl 2  (predict for XP_075099563.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016440138.2)
chlo 7  (predict for XP_075099561.1)
mito 4,  chlo 4  (predict for XP_075099562.1)
mito 4,  chlo 4  (predict for XP_075099563.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107765953
nta-r.1
for
107775408
nta-r.1
for
107810846
nta-r.1
for
107768930
sly-u.5
for
101259346
sot-r.1
for
102593888
ath-u.5
for
LOH1
gma-u.5
for
100790692
gma-u.5
for
100775770
bra-r.6
for
103828555
vvi-u.5
for
100252435
ppo-u.5
for
7469379
mtr-u.5
for
11429426
ghi-r.1
for
107922770
bna-r.1
for
106366679
bna-r.1
for
BNACNNG00400D
cit-r.1
for
102620415
osa-u.5
for
4336259
zma-u.5
for
100193495
tae-r.2
for
123189618
tae-r.2
for
123045866
hvu-r.1
for
123427094
sbi-r.1
for
8073713
bdi-r.1
for
100821999


Ortholog ID: 9510
Species nta nta nta sly sot ath gma gma bra vvi ppo mtr ghi bna bna cit osa zma tae hvu sbi bdi
Symbol LOC107775408 LOC107810846 LOC107768930 LOC101259346 LOC102593888 LOH1 LOC100790692 LOC100775770 LOC103828555 LOC100252435 LOC7469379 LOC11429426 LOC107922770 LOC106366679 BNACNNG00400D LOC102620415 LOC4336259 LOC100193495 LOC123189618 LOC123427094 LOC8073713 LOC100821999
Function* putative CRM domain-containing protein At3g25440, chloroplastic putative CRM domain-containing protein At3g25440, chloroplastic putative CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107775408 107810846 107768930 101259346 102593888 822128 100790692 100775770 103828555 100252435 7469379 11429426 107922770 106366679 106402900 102620415 4336259 100193495 123189618 123427094 8073713 100821999
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