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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107768396   uncharacterized LOC107768396 
 nta-r.1   107798641   uncharacterized LOC107798641 
 sly-u.5   101254211   uncharacterized LOC101254211 
 sot-r.1   102599476   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 ath-u.5   AT3G49640   Aldolase-type TIM barrel family protein 
 gma-u.5   100791745   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 gma-u.5   100787829   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 bra-r.6   103873037   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 vvi-u.5   100853975   uncharacterized LOC100853975 
 mtr-u.5   11444796   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 ghi-r.1   107950501   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 ghi-r.1   121215303   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 bna-r.1   106347408   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 bna-r.1   106418663   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 cit-r.1   102628574   uncharacterized LOC102628574 
 osa-u.5   4336488   uncharacterized LOC4336488 
 zma-u.5   100193915   uncharacterized LOC100193915 
 tae-r.2   123053909   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 tae-r.2   123189803   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 tae-r.2   123046033   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 hvu-r.1   123427334   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 sbi-r.1   8056045   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 bdi-r.1   100837531   tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 
 cre-r.1   CHLRE_13g592300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107768396 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107768396 (nta-r.1 coexpression data)

CoexMap"107768396"


ntaLOC107768396 | Entrez gene ID : 107768396    
Species nta sly sot ath gma bra vvi mtr ghi bna cit osa zma tae hvu sbi bdi cre ppo
Paralog 2 1 1 1 2 1 1 1 2 2 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002943 [list] [network] tRNA dihydrouridine synthesis  (4 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (10 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (274 genes)  IEA  
Protein XP_075099719.1 [sequence] [blastp]
XP_075099720.1 [sequence] [blastp]
XP_075099721.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  pero 1  (predict for XP_075099719.1)
cyto 6,  chlo 2,  nucl 1,  pero 1  (predict for XP_075099720.1)
cyto 6,  chlo 2,  nucl 1,  pero 1  (predict for XP_075099721.1)
Subcellular
localization
TargetP
scret 6,  mito 6  (predict for XP_075099719.1)
scret 6,  mito 6  (predict for XP_075099720.1)
scret 6,  mito 6  (predict for XP_075099721.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107768396
nta-r.1
for
107798641
sly-u.5
for
101254211
sot-r.1
for
102599476
ath-u.5
for
AT3G49640
gma-u.5
for
100791745
gma-u.5
for
100787829
bra-r.6
for
103873037
vvi-u.5
for
100853975
mtr-u.5
for
11444796
ghi-r.1
for
107950501
ghi-r.1
for
121215303
bna-r.1
for
106347408
bna-r.1
for
106418663
cit-r.1
for
102628574
osa-u.5
for
4336488
zma-u.5
for
100193915
tae-r.2
for
123053909
tae-r.2
for
123189803
tae-r.2
for
123046033
hvu-r.1
for
123427334
sbi-r.1
for
8056045
bdi-r.1
for
100837531
cre-r.1
for
CHLRE_13g592300v5


Ortholog ID: 10816
Species nta nta sly sot ath gma gma bra vvi mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107768396 LOC107798641 LOC101254211 LOC102599476 AT3G49640 LOC100791745 LOC100787829 LOC103873037 LOC100853975 LOC11444796 LOC107950501 LOC121215303 LOC106347408 LOC106418663 LOC102628574 LOC4336488 LOC100193915 LOC123053909 LOC123189803 LOC123046033 LOC123427334 LOC8056045 LOC100837531 CHLRE_13g592300v5
Function* uncharacterized LOC107768396 uncharacterized LOC107798641 uncharacterized LOC101254211 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like Aldolase-type TIM barrel family protein tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like uncharacterized LOC100853975 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like uncharacterized LOC102628574 uncharacterized LOC4336488 uncharacterized LOC100193915 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like tRNA-dihydrouridine(20) synthase [NAD(P)+]-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03010 Ribosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00470 D-Amino acid metabolism 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi00470 D-Amino acid metabolism 2
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107768396 107798641 101254211 102599476 824126 100791745 100787829 103873037 100853975 11444796 107950501 121215303 106347408 106418663 102628574 4336488 100193915 123053909 123189803 123046033 123427334 8056045 100837531 5718663
The preparation time of this page was 1.5 [sec].