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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107768422   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 sly-u.5   101257288   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 sly-u.5   101252055   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 sly-u.5   543882   putative FtsH protease 
 ath-u.5   ftsh4   FTSH protease 4 
 ath-u.5   FTSH11   FTSH protease 11 
 gma-u.5   100815980   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 gma-u.5   100814187   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like 
 gma-u.5   100808349   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 vvi-u.5   100252645   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 vvi-u.5   100250114   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 ppo-u.5   7470693   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 ppo-u.5   7485221   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 ppo-u.5   7475612   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 mtr-u.5   11421454   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 mtr-u.5   11433616   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 mtr-u.5   11434270   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 osa-u.5   4326617   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial-like 
 osa-u.5   4326311   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like 
 osa-u.5   4326310   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 zma-u.5   100382151   uncharacterized LOC100382151 
 zma-u.5   103635431   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 zma-u.5   100384366   ATP-dependent zinc metalloprotease FTSH 4 mitochondrial 

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Top 50 coexpressed genes to 107768422 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107768422 (nta-r.1 coexpression data)

CoexMap"107768422"


ntaLOC107768422 | Entrez gene ID : 107768422      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 3 2 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045037 [list] [network] protein import into chloroplast stroma  (23 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (1504 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1165 genes)  IEA  
GO:0016020 [list] [network] membrane  (5892 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (67 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (105 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (824 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_016443038.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_016443038.2)
Subcellular
localization
TargetP
mito 9  (predict for XP_016443038.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107768422
sly-u.5
for
101257288
sly-u.5
for
101252055
sly-u.5
for
543882
ath-u.5
for
ftsh4
ath-u.5
for
FTSH11
gma-u.5
for
100815980
gma-u.5
for
100814187
gma-u.5
for
100808349
vvi-u.5
for
100252645
vvi-u.5
for
100250114
ppo-u.5
for
7470693
ppo-u.5
for
7485221
ppo-u.5
for
7475612
mtr-u.5
for
11421454
mtr-u.5
for
11433616
mtr-u.5
for
11434270
osa-u.5
for
4326617
osa-u.5
for
4326311
osa-u.5
for
4326310
zma-u.5
for
100382151
zma-u.5
for
103635431
zma-u.5
for
100384366


Ortholog ID: 1009
Species nta nta sly sly sot sot ath ath gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa osa zma zma tae tae sbi bdi bdi cre cre
Symbol LOC107830288 LOC107796013 LOC101257288 LOC543882 LOC102591239 LOC102585612 ftsh4 FTSH11 LOC100784979 LOC103852050 LOC103842161 LOC100250114 LOC100252645 LOC7485221 LOC7470693 LOC11421454 LOC11434270 LOC107904258 LOC107890764 LOC106368543 LOC106414951 LOC102621961 LOC102607606 LOC4326310 LOC4326311 LOC103636076 LOC100384366 LOC123123713 LOC123069966 LOC8078625 LOC100831547 LOC100842853 CHLRE_14g625625v5 CHLRE_13g568400v5
Function* ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial putative FtsH protease ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial FTSH protease 4 FTSH protease 11 ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4 mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00053 Ascorbate and aldarate metabolism 3
ath00480 Glutathione metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 4
ghi03018 RNA degradation 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00480 Glutathione metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
osa04075 Plant hormone signal transduction 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00051 Fructose and mannose metabolism 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma00541 Biosynthesis of various nucleotide sugars 2
zma01240 Biosynthesis of cofactors 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03050 Proteasome 2
sbi03018 RNA degradation 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 3
bdi01240 Biosynthesis of cofactors 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi00071 Fatty acid degradation 2
bdi01212 Fatty acid metabolism 2
bdi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107830288 107796013 101257288 543882 102591239 102585612 817154 835398 100784979 103852050 103842161 100250114 100252645 7485221 7470693 11421454 11434270 107904258 107890764 106368543 106414951 102621961 102607606 4326310 4326311 103636076 100384366 123123713 123069966 8078625 100831547 100842853 5718294 5719092
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